Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   VO177_RS08910 Genome accession   NZ_CP141828
Coordinates   1774035..1774994 (+) Length   319 a.a.
NCBI ID   WP_223204411.1    Uniprot ID   -
Organism   Bacillus velezensis strain TZS01     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1769035..1779994
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VO177_RS08885 (VO177_08885) - 1769508..1770059 (+) 552 WP_003152033.1 cysteine hydrolase family protein -
  VO177_RS08890 (VO177_08890) - 1770077..1771543 (+) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  VO177_RS08895 (VO177_08895) - 1771673..1772896 (+) 1224 WP_007613436.1 EAL and HDOD domain-containing protein -
  VO177_RS08900 (VO177_08900) - 1772903..1773244 (-) 342 WP_095060627.1 hypothetical protein -
  VO177_RS08905 (VO177_08905) degQ 1773710..1773850 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  VO177_RS08910 (VO177_08910) comQ 1774035..1774994 (+) 960 WP_223204411.1 polyprenyl synthetase family protein Regulator
  VO177_RS08920 (VO177_08920) comP 1775120..1777423 (+) 2304 WP_021495364.1 histidine kinase Regulator
  VO177_RS08925 (VO177_08925) comA 1777504..1778148 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  VO177_RS08930 (VO177_08930) - 1778170..1778553 (+) 384 WP_007613430.1 hotdog fold thioesterase -
  VO177_RS08935 (VO177_08935) mnhG 1778593..1778967 (-) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  VO177_RS08940 (VO177_08940) - 1778951..1779235 (-) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  VO177_RS08945 (VO177_08945) - 1779235..1779711 (-) 477 WP_007408672.1 Na+/H+ antiporter subunit E -

Sequence


Protein


Download         Length: 319 a.a.        Molecular weight: 36682.99 Da        Isoelectric Point: 5.1474

>NTDB_id=919956 VO177_RS08910 WP_223204411.1 1774035..1774994(+) (comQ) [Bacillus velezensis strain TZS01]
MKSIIERNIFNEHLMQLLLSFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLTSDIIDDLEDEDNRDAPWM
KIDRSLALNAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPKTEDECLEVIKLKCGSLFALANVTGT
LLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQELLCIFSDQKLYSQLRLNKK
EFIQKLYDSGASQYVSVLYQLYMYKCETEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEFNKLFFELSGCIKETEKQ

Nucleotide


Download         Length: 960 bp        

>NTDB_id=919956 VO177_RS08910 WP_223204411.1 1774035..1774994(+) (comQ) [Bacillus velezensis strain TZS01]
ATGAAGAGTATAATAGAGCGGAACATATTTAATGAACATCTAATGCAGCTCCTTCTCAGTTTTATTGAACCAAAAAAAAA
TTTTTCTCTAGCTGAATCAGCTGTTTTGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTG
CCGCTATTGAAATTCTTACACTTACTTCCGATATAATTGATGATCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATG
AAGATAGATCGTTCACTAGCATTAAATGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTAC
GAATCCTTTAGTGATTAAGTATGTATTAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAAC
CAAAGACAGAAGATGAATGTTTAGAGGTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACG
CTTTTAGCAACTGGAGAATTCAATAAGTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGCGA
TTATCATGCTATTTTTAAGGATAATACTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCT
TGTTTAATAAGTCTTCTCAAGAATTGCTTTGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAA
GAGTTTATTCAAAAGCTGTATGATTCTGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGTATAAGTGTGA
AACTGAAGTTGAAAATTTAAATTTAGATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATA
AGAAGGATGATGAAGATGCAGAATTTAATAAATTATTTTTTGAATTATCCGGATGTATTAAAGAAACTGAAAAGCAATGA

Domains


Predicted by InterProScan.

(41-214)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

62.284

90.596

0.564