Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   VO177_RS08905 Genome accession   NZ_CP141828
Coordinates   1773710..1773850 (+) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain TZS01     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1768710..1778850
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VO177_RS08880 (VO177_08880) - 1769013..1769411 (+) 399 WP_021495368.1 YueI family protein -
  VO177_RS08885 (VO177_08885) - 1769508..1770059 (+) 552 WP_003152033.1 cysteine hydrolase family protein -
  VO177_RS08890 (VO177_08890) - 1770077..1771543 (+) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  VO177_RS08895 (VO177_08895) - 1771673..1772896 (+) 1224 WP_007613436.1 EAL and HDOD domain-containing protein -
  VO177_RS08900 (VO177_08900) - 1772903..1773244 (-) 342 WP_095060627.1 hypothetical protein -
  VO177_RS08905 (VO177_08905) degQ 1773710..1773850 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  VO177_RS08910 (VO177_08910) comQ 1774035..1774994 (+) 960 WP_223204411.1 polyprenyl synthetase family protein Regulator
  VO177_RS08920 (VO177_08920) comP 1775120..1777423 (+) 2304 WP_021495364.1 histidine kinase Regulator
  VO177_RS08925 (VO177_08925) comA 1777504..1778148 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  VO177_RS08930 (VO177_08930) - 1778170..1778553 (+) 384 WP_007613430.1 hotdog fold thioesterase -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=919955 VO177_RS08905 WP_003152043.1 1773710..1773850(+) (degQ) [Bacillus velezensis strain TZS01]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=919955 VO177_RS08905 WP_003152043.1 1773710..1773850(+) (degQ) [Bacillus velezensis strain TZS01]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891