Detailed information NTG0918523

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: VNN52_RS01480
• Genome accession: NZ_CP141701
• Coordinates: 293433..295643 (-)
• Length: 736 a.a.
• NCBI ID: WP_153924542.1
• Uniprot ID: -
• Organism: Lactococcus petauri strain M18012501 FF2g6
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 288433..300643

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN52_RS01450 (VNN52_01450)	atpA	288687..290195 (-)	1509	WP_004259170.1	F0F1 ATP synthase subunit alpha	-
VNN52_RS01455 (VNN52_01455)	-	290261..290788 (-)	528	WP_404897121.1	F0F1 ATP synthase subunit delta	-
VNN52_RS01460 (VNN52_01460)	atpF	290803..291309 (-)	507	WP_004259173.1	F0F1 ATP synthase subunit B	-
VNN52_RS01465 (VNN52_01465)	atpB	291323..292036 (-)	714	WP_004259176.1	F0F1 ATP synthase subunit A	-
VNN52_RS01470 (VNN52_01470)	-	292091..292306 (-)	216	WP_003135074.1	F0F1 ATP synthase subunit C	-
VNN52_RS01475 (VNN52_01475)	-	292502..293278 (-)	777	WP_407346491.1	alpha/beta hydrolase	-
VNN52_RS01480 (VNN52_01480)	comEC	293433..295643 (-)	2211	WP_153924542.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
VNN52_RS01485 (VNN52_01485)	-	295663..296308 (-)	646	Protein_293	helix-hairpin-helix domain-containing protein	-
VNN52_RS01490 (VNN52_01490)	-	296366..297541 (-)	1176	WP_153924539.1	SLC13 family permease	-
VNN52_RS01495 (VNN52_01495)	-	297707..299263 (-)	1557	WP_019292098.1	ABC-F family ATP-binding cassette domain-containing protein	-
VNN52_RS01500 (VNN52_01500)	-	299410..300054 (-)	645	WP_019292099.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 85147.12 Da
• Isoelectric Point: 9.7729

>NTDB_id=918523 VNN52_RS01480 WP_153924542.1 293433..295643(-) (comEC) [Lactococcus petauri strain M18012501 FF2g6]
MKQKFTLIYLVYLLVFVYFLIFSFSWPLLILSLFSLFIAFYRQYYSLLALLLCFSFFLLMVKKETEVQEIQQPEKISKIT
PYMDTLQVNGNRLSFRGEVNGRDFQAFYTLTSEKEKEYFKNLRIKGIFYIEGTLDIPEEQRNFSSFDYRKYLRTQGIYRL
LKIEKIEGFEEKHDFDLRLVRRKAILWTQEHFPSPMSSYMTGLLFGWLDKDFEEMGELYTSLGIIHLFALSGMQVNFFIE
LLRNILLRLGLSRKLVYFIQIPFSIFYAFLTGLSLSILRALLQKNIPIKNSSDRFSITFLLLMIFSPYFLLTTGGQLTML
YSFLITFFSQKFNELKGLKRALLDSTVLAVGVLPLLIFHFHSFQPLSIILTLLFSLIFDFLLLPGLLFVFLLSLVGIDLT
LLNPFFIILESIVRLVGSLFDKPIVFGKPNLIFLLLLFMLSGLALDFYRKRNWNLVVIIVLFFLFFLVKNPKHPSITMVD
VGQGDSILLQDRWNSQNILIDTGGRLKIRADEQWKEGIYKSNAESTLLPYLRASGVSKVDVLIVTHPDEDHIGDLESVAQ
KVPIKNIYVSASALEKKNFVKKLSSLKSQIHIVQEGDKLPIFNSYLRFLTTGGEGKSDNDNSLVTFGEFYGKKFLFTGDL
EEEGEVKLQKEYPHLEVDILKVGHHGSKTSTKEGFLEAIKPKVALISAGKNNRYKHPSQETLHQLTARGIKIYRTDQQGA
IRFLYKKGTWQIQTVK

Nucleotide

• Length: 2211 bp

>NTDB_id=918523 VNN52_RS01480 WP_153924542.1 293433..295643(-) (comEC) [Lactococcus petauri strain M18012501 FF2g6]
ATGAAACAAAAATTTACGCTTATCTATTTAGTCTATCTCTTAGTTTTTGTTTATTTTCTTATTTTCAGTTTTTCATGGCC
TTTACTTATTCTTAGTTTGTTTAGTCTCTTCATCGCTTTTTATCGTCAATACTATAGTTTGTTAGCTCTTTTACTGTGCT
TTAGTTTCTTCTTACTCATGGTAAAAAAAGAGACAGAAGTACAAGAAATACAACAACCAGAAAAAATTTCGAAGATTACC
CCTTATATGGATACTCTTCAAGTGAATGGAAATAGGCTCAGTTTCAGGGGAGAAGTGAACGGAAGAGATTTTCAAGCTTT
TTACACATTGACTTCGGAAAAAGAAAAAGAATACTTTAAAAATCTTAGGATAAAGGGGATTTTTTACATTGAAGGCACTT
TAGATATCCCAGAAGAGCAAAGAAACTTTTCAAGTTTTGATTACAGAAAGTATTTAAGAACGCAAGGTATTTACCGACTT
CTTAAAATAGAAAAAATTGAAGGATTTGAAGAAAAACATGACTTTGATTTACGGCTGGTACGCCGAAAAGCCATTCTTTG
GACACAAGAACATTTTCCTTCTCCCATGTCGTCCTATATGACAGGGCTTCTTTTTGGTTGGTTGGATAAAGACTTTGAAG
AAATGGGGGAGCTTTATACTAGCCTCGGTATTATCCATTTATTTGCCCTGTCAGGGATGCAGGTGAATTTTTTTATTGAA
CTTCTTCGAAATATTTTATTAAGGCTAGGTTTATCAAGAAAGTTGGTCTATTTTATCCAAATTCCCTTTTCGATATTTTA
TGCTTTTCTTACTGGCTTATCTCTCTCAATCTTACGTGCGCTTCTTCAAAAAAATATACCTATTAAAAATTCAAGCGATA
GATTTTCTATCACTTTTCTTCTTTTAATGATATTCAGTCCATATTTCCTACTGACAACAGGAGGACAACTGACGATGCTC
TATTCTTTCTTAATCACATTTTTTTCACAAAAATTCAATGAACTAAAAGGATTAAAAAGAGCATTACTTGATTCTACTGT
TCTAGCTGTTGGGGTACTTCCGCTTTTGATTTTTCACTTCCATTCTTTCCAACCATTATCGATTATATTGACTTTATTAT
TTAGTCTGATTTTTGATTTTTTACTTTTGCCAGGTTTACTTTTTGTCTTTCTCCTTTCTTTAGTCGGCATTGATCTTACA
TTACTTAATCCTTTTTTTATTATTTTAGAATCAATAGTAAGACTGGTTGGCAGTTTATTTGATAAACCGATTGTATTTGG
CAAACCAAATCTTATTTTTTTACTTTTGCTTTTTATGCTAAGTGGACTTGCACTCGATTTTTACAGAAAAAGAAACTGGA
ACTTAGTTGTAATAATTGTTCTTTTCTTTCTTTTTTTCCTTGTTAAGAATCCTAAACACCCAAGCATTACAATGGTAGAT
GTGGGCCAAGGAGACAGTATTCTCTTGCAAGACAGGTGGAACAGTCAAAATATCTTAATTGATACTGGCGGTAGATTAAA
AATAAGAGCTGATGAGCAGTGGAAGGAGGGAATTTATAAGAGCAATGCTGAAAGTACACTTCTACCTTATCTGAGAGCGA
GTGGAGTGAGCAAAGTAGATGTTCTGATTGTGACACATCCAGATGAGGATCATATTGGTGACTTGGAGAGTGTAGCTCAG
AAAGTACCAATAAAAAATATTTATGTCTCAGCTAGTGCATTAGAGAAGAAAAATTTTGTTAAAAAACTAAGCAGCTTAAA
AAGTCAGATTCACATTGTGCAAGAGGGAGACAAGCTCCCCATATTTAACAGTTATCTCCGGTTTCTAACGACAGGAGGTG
AAGGAAAAAGCGATAATGATAATTCTTTAGTAACGTTTGGTGAATTTTATGGGAAGAAATTTCTTTTTACAGGTGACTTA
GAAGAAGAGGGAGAGGTTAAACTCCAGAAAGAATATCCACATTTAGAGGTTGATATCCTAAAAGTTGGACATCATGGCAG
TAAGACTTCTACAAAGGAAGGTTTTTTAGAAGCGATTAAGCCTAAGGTTGCTCTTATTTCTGCTGGAAAGAATAATCGAT
ATAAACATCCGAGTCAAGAAACGCTTCACCAATTAACTGCACGAGGAATAAAAATTTATCGGACAGACCAGCAAGGAGCA
ATCCGTTTCCTTTATAAAAAAGGCACTTGGCAAATTCAAACAGTAAAGTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (481-689)

• Domain of unknown function (DUF4131) (DUF4131) (23-167)

• Competence protein (Competence) (203-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	52.66	99.592	0.524
comEC/celB	Streptococcus mitis SK321	45.101	100	0.457
comEC/celB	Streptococcus pneumoniae TIGR4	43.876	100	0.443
comEC/celB	Streptococcus mitis NCTC 12261	43.801	100	0.442
comEC/celB	Streptococcus pneumoniae Rx1	43.472	100	0.439
comEC/celB	Streptococcus pneumoniae D39	43.472	100	0.439
comEC/celB	Streptococcus pneumoniae R6	43.472	100	0.439