Detailed information NTG0918477

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: VNN27_RS01485
• Genome accession: NZ_CP141700
• Coordinates: 298291..300501 (-)
• Length: 736 a.a.
• NCBI ID: WP_346350081.1
• Uniprot ID: -
• Organism: Lactococcus petauri strain R22-25 IC35
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 293291..305501

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VNN27_RS01455 (VNN27_01455)	atpA	293545..295053 (-)	1509	WP_004259170.1	F0F1 ATP synthase subunit alpha	-
VNN27_RS01460 (VNN27_01460)	-	295119..295646 (-)	528	WP_117517210.1	F0F1 ATP synthase subunit delta	-
VNN27_RS01465 (VNN27_01465)	atpF	295661..296167 (-)	507	WP_004259173.1	F0F1 ATP synthase subunit B	-
VNN27_RS01470 (VNN27_01470)	atpB	296181..296894 (-)	714	WP_019293624.1	F0F1 ATP synthase subunit A	-
VNN27_RS01475 (VNN27_01475)	-	296949..297164 (-)	216	WP_003135074.1	F0F1 ATP synthase subunit C	-
VNN27_RS01480 (VNN27_01480)	-	297360..298136 (-)	777	WP_029343492.1	alpha/beta hydrolase family protein	-
VNN27_RS01485 (VNN27_01485)	comEC	298291..300501 (-)	2211	WP_346350081.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
VNN27_RS01490 (VNN27_01490)	-	300521..301165 (-)	645	WP_019293627.1	helix-hairpin-helix domain-containing protein	-
VNN27_RS01495 (VNN27_01495)	-	301223..302398 (-)	1176	WP_019292097.1	SLC13 family permease	-
VNN27_RS01500 (VNN27_01500)	-	302564..304120 (-)	1557	WP_019292098.1	ATP-binding cassette domain-containing protein	-
VNN27_RS01505 (VNN27_01505)	-	304267..304911 (-)	645	WP_019293598.1	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 85082.05 Da
• Isoelectric Point: 9.7859

>NTDB_id=918477 VNN27_RS01485 WP_346350081.1 298291..300501(-) (comEC) [Lactococcus petauri strain R22-25 IC35]
MKQKFTLIYLVYLLVFVYFLIFSFSWPLLILSLFSLFIAFYRQYYSLLALLLCFSFFLLMVKKETEVQEIQQPEKISKIT
PYMDTLQVNGNRLSFRGEVNGRDFQAFYTLTSEKEKEYFKNLRIKGIFYIEGTLEIPEEQRNFSGFDYRKYLRTQGISRL
LKIEKIEGFEEKHDFDLRLVRRKAILWTQEHFPSPMSSYMTGLLFGWLDKDFEEMGELYTSLGIIHLFALSGMQVNFFIE
LLRNILLRLGLSRKLVYFIQIPFSIFYAFLTGLSLSILRALLQKNIPIKNSSDRFSITFLLLMIFSPYFLLTTGGQLTML
YSFLITFFSQKFNELKGLKRALLDSTVLAVGVLPLLIFHFHSFQPLSIILTLLFSLIFDFLLLPGLLFVFLLSLFGIDLT
LLNPFFIILESIVRLVGSLFDKPIVFGKPNLIFLLLLFMLSGLALDFYRKRNWNLVVIIVLFFLFFLVKNPKHPNITMVD
VGQGDSILLQDRWNSQNILIDTGGRLKIRADEQWKEGIYKSNAESTLLPYLRASGVSKVDVLIVTHPDEDHIGDLESVAQ
KVPIKNIYVSASALEKKNFVKKLSSLKSQIHIVQEGDKLPIFNSYLRFLTTGGEGKSDNDNSLVTFGEFYGKKFLFTGDL
EEEGEVKLQKEYPHLEVDILKVGHHGSKTSTKEGFLEAIKPKVALISAGKNNRYKHPSQETLHQLTARGIKIYRTDQQGA
IRLLYKKGSWQIQTVK

Nucleotide

• Length: 2211 bp

>NTDB_id=918477 VNN27_RS01485 WP_346350081.1 298291..300501(-) (comEC) [Lactococcus petauri strain R22-25 IC35]
ATGAAACAAAAATTTACGCTTATCTATTTAGTATATCTCTTAGTTTTTGTTTATTTTCTTATTTTCAGTTTTTCATGGCC
TTTACTTATTCTTAGTTTGTTTAGTCTCTTCATCGCTTTTTATCGTCAATACTATAGTTTGTTAGCCCTTTTACTGTGCT
TTAGTTTCTTCTTACTCATGGTAAAAAAAGAGACAGAAGTACAGGAAATACAACAACCAGAAAAAATTTCGAAGATTACC
CCTTATATGGATACTCTTCAAGTGAATGGAAACAGACTCAGTTTCAGGGGAGAAGTGAACGGAAGAGATTTCCAAGCTTT
TTACACATTGACTTCGGAAAAAGAAAAAGAATACTTTAAAAATCTTAGGATAAAGGGGATTTTTTACATTGAAGGCACAT
TAGAGATACCAGAAGAGCAAAGAAACTTTTCAGGTTTTGATTACAGAAAGTATTTAAGGACGCAAGGTATTTCCCGACTT
CTTAAAATAGAAAAAATTGAAGGATTTGAAGAAAAACATGACTTTGATTTACGGCTGGTACGCCGAAAAGCTATTCTTTG
GACACAAGAACATTTTCCTTCTCCCATGTCGTCCTATATGACAGGGCTTCTTTTTGGTTGGTTGGATAAAGACTTTGAAG
AAATGGGGGAACTTTATACTAGCCTCGGTATTATCCATTTATTTGCCCTGTCAGGGATGCAGGTAAATTTTTTTATTGAA
CTTCTTCGAAATATTTTATTAAGGCTAGGTTTATCAAGAAAGTTGGTCTATTTTATCCAAATTCCCTTTTCGATATTTTA
TGCTTTTCTTACTGGCTTATCTCTCTCAATCTTACGTGCGCTTCTTCAAAAAAATATACCTATTAAAAATTCAAGCGATA
GATTTTCTATCACTTTTCTTCTTTTAATGATATTCAGTCCATATTTCCTACTGACAACAGGAGGACAACTGACGATGCTC
TATTCTTTCTTAATCACATTTTTTTCACAAAAATTCAATGAACTAAAAGGATTAAAAAGAGCATTACTTGATTCTACTGT
TCTAGCTGTTGGGGTACTTCCGCTTTTGATTTTTCACTTCCATTCTTTCCAACCATTATCGATTATATTGACTTTATTAT
TTAGTCTGATTTTTGATTTTTTACTTTTGCCTGGTTTACTTTTTGTCTTTCTCCTTTCTTTATTCGGCATTGATCTTACA
TTACTTAATCCTTTTTTTATTATTTTAGAATCAATAGTAAGACTGGTTGGCAGTTTATTTGATAAACCGATTGTATTTGG
CAAACCAAATCTTATTTTTTTACTTTTGCTTTTTATGCTAAGTGGACTTGCACTCGATTTTTACAGAAAAAGAAACTGGA
ACTTAGTTGTAATAATTGTTCTTTTCTTTCTTTTTTTCCTTGTTAAGAATCCTAAACACCCAAATATTACAATGGTAGAT
GTGGGCCAAGGAGACAGCATTCTCTTGCAAGACAGGTGGAACAGTCAAAATATCTTAATTGATACTGGCGGTAGATTAAA
AATAAGAGCTGATGAGCAGTGGAAGGAGGGAATTTATAAGAGCAATGCTGAAAGTACACTTCTACCTTATCTGAGAGCGA
GTGGAGTGAGCAAAGTAGATGTTCTGATTGTGACACATCCAGATGAGGATCATATTGGAGACTTGGAGAGTGTAGCTCAG
AAAGTACCAATAAAAAATATTTATGTATCAGCTAGTGCATTAGAGAAGAAAAATTTTGTTAAAAAACTAAGCAGCTTAAA
AAGTCAGATTCACATTGTGCAAGAGGGAGACAAGCTCCCCATATTTAACAGTTATCTCCGGTTTCTAACGACAGGAGGTG
AAGGAAAAAGCGATAATGATAATTCTTTAGTGACGTTTGGTGAATTTTATGGGAAGAAATTTCTTTTTACAGGTGACTTA
GAAGAAGAGGGAGAGGTTAAACTCCAGAAAGAATATCCACATTTAGAGGTTGATATCCTAAAAGTTGGACATCATGGCAG
TAAGACTTCTACAAAGGAAGGTTTTTTAGAAGCGATTAAGCCTAAGGTTGCTCTTATTTCTGCTGGAAAGAATAATCGAT
ATAAACATCCGAGTCAAGAAACGCTTCACCAATTAACTGCACGAGGAATAAAAATTTATCGGACAGACCAGCAAGGAGCA
ATCCGTCTCCTTTATAAAAAAGGCAGTTGGCAAATTCAAACAGTAAAGTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (481-689)

• Domain of unknown function (DUF4131) (DUF4131) (23-167)

• Competence protein (Competence) (203-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	52.66	99.592	0.524
comEC/celB	Streptococcus mitis SK321	45.235	100	0.458
comEC/celB	Streptococcus pneumoniae TIGR4	44.011	100	0.444
comEC/celB	Streptococcus mitis NCTC 12261	43.935	100	0.443
comEC/celB	Streptococcus pneumoniae Rx1	43.607	100	0.44
comEC/celB	Streptococcus pneumoniae D39	43.607	100	0.44
comEC/celB	Streptococcus pneumoniae R6	43.607	100	0.44