Detailed information NTG0918372

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: ABZO29_RS28715
• Genome accession: NZ_CP160403
• Coordinates: 6250748..6252034 (+)
• Length: 428 a.a.
• NCBI ID: WP_367323063.1
• Uniprot ID: -
• Organism: Streptomyces sp. HUAS ZL42
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6245748..6257034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABZO29_RS28680 (ABZO29_28680)	-	6246094..6246288 (+)	195	WP_367323059.1	hypothetical protein	-
ABZO29_RS28685 (ABZO29_28685)	-	6246382..6246768 (-)	387	WP_367323060.1	hypothetical protein	-
ABZO29_RS28700 (ABZO29_28700)	tig	6247443..6248834 (+)	1392	WP_367323061.1	trigger factor	-
ABZO29_RS28705 (ABZO29_28705)	clpP	6249205..6249813 (+)	609	WP_055570713.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ABZO29_RS28710 (ABZO29_28710)	clpP	6249884..6250564 (+)	681	WP_367323062.1	ATP-dependent Clp protease proteolytic subunit	Regulator
ABZO29_RS28715 (ABZO29_28715)	clpX	6250748..6252034 (+)	1287	WP_367323063.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
ABZO29_RS28720 (ABZO29_28720)	-	6252101..6253111 (-)	1011	WP_367323064.1	hypothetical protein	-
ABZO29_RS28725 (ABZO29_28725)	-	6253248..6255872 (+)	2625	WP_367323065.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46806.65 Da
• Isoelectric Point: 4.7809

>NTDB_id=918372 ABZO29_RS28715 WP_367323063.1 6250748..6252034(+) (clpX) [Streptomyces sp. HUAS ZL42]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIEARAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=918372 ABZO29_RS28715 WP_367323063.1 6250748..6252034(+) (clpX) [Streptomyces sp. HUAS ZL42]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACCA
GCGAGGTCCGCTGGGAGGAACTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTATGTGGTCGGCCAGGAGGCG
GCCAAGAAGGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGCCCAAGGGCG
GGACGACGCCATCGAGTTGGCCAAGTCCAACATCCTTCTGCTGGGCCCCACGGGCTCCGGGAAGACCCTCCTCGCACAGA
CCCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGCAAGAGCGAGAACCCCTCCATCACGCGCGACGTGAGCGGTGAGGGCGTGCAGCAGGCGC
TGCTGAAGATCCTCGAGGGCACCACCGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGATCATCGAGGCGCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAACTCGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTGCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTGCAGATCCTCGTCGAGCCCCGCAACGCGCTCGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGACTGC
GGGCCATCATGGAAGAGGTCCTGATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCACGGGTCGTCATCACG
GCGGACGTCGTCCACTCCAACGTGAACCCGACCCTGATCCCGCGGGATGCCCGCGGCCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	93.925	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526