NTDB

Overview

Name	cclA/cilC	Type	Machinery gene
Locus tag	ABVF41_RS02625	Genome accession	NZ_CP160385
Coordinates	504768..505424 (-)	Length	218 a.a.
NCBI ID	WP_002279623.1	Uniprot ID	Q8DVF1
Organism	Streptococcus mutans strain UA159-WCSS
Function	processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 499768..510424

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABVF41_RS02600 (ABVF41_02600)	trpD	500202..501209 (+)	1008	WP_002262053.1	anthranilate phosphoribosyltransferase	-
ABVF41_RS02605 (ABVF41_02605)	trpC	501202..501969 (+)	768	WP_002262054.1	indole-3-glycerol phosphate synthase TrpC	-
ABVF41_RS02610 (ABVF41_02610)	-	501956..502537 (+)	582	WP_002262055.1	phosphoribosylanthranilate isomerase	-
ABVF41_RS02615 (ABVF41_02615)	trpB	502534..503745 (+)	1212	WP_002262056.1	tryptophan synthase subunit beta	-
ABVF41_RS02620 (ABVF41_02620)	trpA	503749..504531 (+)	783	WP_002262057.1	tryptophan synthase subunit alpha	-
ABVF41_RS02625 (ABVF41_02625)	cclA/cilC	504768..505424 (-)	657	WP_002279623.1	A24 family peptidase	Machinery gene
ABVF41_RS02630 (ABVF41_02630)	dpr	505525..506052 (+)	528	WP_002262059.1	DNA starvation/stationary phase protection protein	-
ABVF41_RS02635 (ABVF41_02635)	-	506259..506465 (+)	207	WP_002262060.1	YqgQ family protein	-
ABVF41_RS02640 (ABVF41_02640)	-	506458..507429 (+)	972	WP_002262061.1	ROK family glucokinase	-
ABVF41_RS02645 (ABVF41_02645)	-	507439..507828 (+)	390	WP_002262062.1	rhodanese-like domain-containing protein	-
ABVF41_RS02650 (ABVF41_02650)	typA	508062..509906 (+)	1845	WP_002262063.1	translational GTPase TypA	-
ABVF41_RS02655 (ABVF41_02655)	-	509935..510189 (+)	255	WP_002262064.1	DUF3165 family protein	-

Sequence

Protein

Download Length: 218 a.a. Molecular weight: 24845.06 Da Isoelectric Point: 8.5763

                                >NTDB_id=917880 ABVF41_RS02625 WP_002279623.1 504768..505424(-) (cclA/cilC) [Streptococcus mutans strain UA159-WCSS]

MKLILFFMLGASLGSFFGLVVDRYPQKSIIFPRSHCNKCYNCLTMRDLIPIFSRIINKNSCRFCGYPIPLRYSLVELLCG

LISTGFALDLLTTSQVCLLFMGVLLSLYDLQDQSYPLTLWIGFTFLLMFIYPLNLISLILFLFGIFAALKNINIGSGDFL

YLATLALSLNLQQIIWIIQIASLLGILYSLLFQKHKEPFAFVPFLFVGHLIIIFSHLI

Nucleotide

Download Length: 657 bp

                                >NTDB_id=917880 ABVF41_RS02625 WP_002279623.1 504768..505424(-) (cclA/cilC) [Streptococcus mutans strain UA159-WCSS]

ATGAAACTTATTTTATTTTTTATGTTGGGAGCTTCTCTTGGCTCTTTCTTTGGCTTAGTTGTTGATCGTTACCCTCAGAA

ATCTATTATATTTCCTAGAAGCCATTGCAATAAGTGTTATAACTGCTTAACCATGAGGGATCTTATCCCAATATTTTCAC

GAATCATCAACAAAAATTCTTGTCGCTTTTGCGGTTACCCTATTCCATTGCGTTATTCTTTGGTAGAATTACTCTGCGGA

CTGATTAGCACAGGTTTTGCTCTTGATTTATTAACCACTTCACAAGTATGTTTGCTCTTCATGGGAGTTCTTTTATCTCT

TTATGATTTACAAGATCAGTCTTATCCTTTGACACTGTGGATAGGCTTTACTTTTCTCTTAATGTTTATCTATCCTCTTA

ACCTAATTAGCTTAATTCTTTTTCTATTTGGTATTTTTGCTGCCCTCAAAAATATTAATATCGGAAGCGGTGATTTCCTC

TATCTGGCTACTTTGGCACTTTCTCTTAATCTTCAGCAAATTATTTGGATTATTCAGATTGCCAGTTTATTAGGAATTCT

TTACAGCCTGCTTTTTCAAAAGCACAAAGAACCTTTTGCTTTTGTTCCTTTCTTATTCGTGGGTCACCTCATTATCATTT

TCTCTCACTTGATTTAA

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(9-87)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	Q8DVF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
cclA/cilC	Streptococcus mitis SK321	42.791	98.624	0.422
cclA/cilC	Streptococcus pneumoniae Rx1	42.254	97.706	0.413
cclA/cilC	Streptococcus pneumoniae D39	42.254	97.706	0.413
cclA/cilC	Streptococcus pneumoniae R6	42.254	97.706	0.413
cclA/cilC	Streptococcus mitis NCTC 12261	41.86	98.624	0.413
cclA/cilC	Streptococcus pneumoniae TIGR4	41.315	97.706	0.404

Detailed information NTG0917880