Detailed information NTG0913607

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: U3Q39_RS18400
• Genome accession: NZ_CP140298
• Coordinates: 3915961..3917298 (+)
• Length: 445 a.a.
• NCBI ID: WP_026006503.1
• Uniprot ID: A0A137YGV3
• Organism: Stutzerimonas stutzeri strain MJL19
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3910961..3922298

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U3Q39_RS18375 (U3Q39_018375)	pgeF	3910991..3911728 (-)	738	WP_170800689.1	peptidoglycan editing factor PgeF	-
U3Q39_RS18380 (U3Q39_018380)	rluD	3911725..3912699 (-)	975	WP_011914661.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
U3Q39_RS18385 (U3Q39_018385)	-	3912904..3913893 (+)	990	WP_048329921.1	outer membrane protein assembly factor BamD	-
U3Q39_RS18390 (U3Q39_018390)	-	3914015..3914248 (+)	234	WP_013984074.1	PP0621 family protein	-
U3Q39_RS18395 (U3Q39_018395)	pilS	3914238..3915830 (+)	1593	WP_013984075.1	sensor histidine kinase	Regulator
U3Q39_RS18400 (U3Q39_018400)	pilR	3915961..3917298 (+)	1338	WP_026006503.1	sigma-54-dependent transcriptional regulator	Regulator
U3Q39_RS18405 (U3Q39_018405)	-	3917342..3918400 (-)	1059	WP_011914666.1	DUF2333 family protein	-
U3Q39_RS18410 (U3Q39_018410)	-	3918618..3920213 (+)	1596	WP_014597755.1	PleD family two-component system response regulator	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49558.09 Da
• Isoelectric Point: 6.4140

>NTDB_id=913607 U3Q39_RS18400 WP_026006503.1 3915961..3917298(+) (pilR) [Stutzerimonas stutzeri strain MJL19]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGSGLELVQHIQQQYPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAEAPVDSRLLGSSPPMKTLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADVM
LRRLAQECGEATARLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSPGLPENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=913607 U3Q39_RS18400 WP_026006503.1 3915961..3917298(+) (pilR) [Stutzerimonas stutzeri strain MJL19]
ATGACCGCGCGCCAGAAAGCCCTGATCATCGACGACGAGCCGGACATCCGCGAGCTGCTGGAGATCACCCTCGGCCGCAT
GAAGCTCGATACCCGCAGCGCACGCAACCTCAAGGAGGCGCGCGAGCTGCTGGCACGCGAGCACTACGACCTGTGCCTGA
CCGATATGCGCCTGCCCGACGGCAGCGGCCTTGAGCTGGTCCAGCACATCCAGCAACAGTACCCGCAACTGCCCGTGGCG
ATGATCACCGCCTATGGCAGCCTGGATACCGCCATCGGCGCACTCAAGGCCGGTGCGTTCGACTTCCTCACCAAACCGGT
GGATCTGAACCGCCTGCGCGAGCTGGTCAGCACCGCCCTGCGCCTGCGCGCGCCGGCAGCCGAAGCGCCGGTGGACAGTC
GCCTGCTGGGCAGCTCGCCGCCGATGAAAACCTTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGCCAGGCACCCGTCTAC
ATCAGCGGCGAGTCGGGCAGCGGCAAGGAACTGGTGGCACGCCTGATTCACGAGCAGGGCCCGCGCAGCGAAAAGCCATT
CGTGCCGGTCAACTGCGGTGCCATTCCGTCGGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAGGGCAGCTTCAGCG
GTGCCATCGAGGACAAGCCCGGCCTGTTCCAGGCCGCCAACGGTGGCACGCTGTTTCTCGACGAGGTGGCGGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCTATCCAGGAAAAGGCCGTGCGTGCCGTTGGCGGTGCGCAGGAAGTGATGGT
CGATGTACGCATCCTCTGCGCCACCCACAAGGATCTCGCCAGCGAGGTCGCCGCAGGCCGTTTTCGCCAGGATCTCTACT
ACCGCCTGAACGTCATCGAACTGCGTGTACCGCCGCTGCGCGAACGCCGCGAAGACATCGGCCTGCTCGCCGATGTCATG
CTGCGCCGTCTGGCGCAGGAATGCGGCGAGGCCACGGCCCGCCTGCATCCCGACGCCCTGGCCAAGCTGGAGAACTACCG
ATTTCCCGGCAACGTCCGCGAGCTGGAGAACATGCTCGAACGCGCCTACACCCTGTGCGAAGGCGACGAGATCAAGGCTG
GCGACCTGCGCCTGGCGGATAGCCCAGGCCTGCCGGAAAACGGCGAAGCCAGCCTGGCGCAGATCGACAACCTGGAGGAC
CACCTGGAGGAGATCGAGCGCAAGCTGATCATGCAGGCCCTCGAAGAAACACGCTGGAACCGCACCGCGGCTGCCCAGCG
ACTGGGGCTGACCTTCCGCTCGATGCGCTACCGTCTGAAGAAACTCGGACTGGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

3D structure

• AlphaFold DB: A0A137YGV3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.586	99.775	0.854
pilR	Acinetobacter baumannii strain A118	50.545	100	0.521
luxO	Vibrio cholerae strain A1552	38.117	100	0.382