Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | U0N78_RS00790 | Genome accession | NZ_CP140109 |
| Coordinates | 129801..130754 (+) | Length | 317 a.a. |
| NCBI ID | WP_043026794.1 | Uniprot ID | A0A0Z8IB17 |
| Organism | Streptococcus suis strain 2022WUSS148 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 124801..135754
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U0N78_RS00750 (U0N78_00750) | - | 124948..125898 (-) | 951 | WP_043026809.1 | S66 family peptidase | - |
| U0N78_RS00755 (U0N78_00755) | comYA | 125984..126934 (+) | 951 | WP_043026808.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| U0N78_RS00760 (U0N78_00760) | comYB | 126846..127883 (+) | 1038 | WP_043026806.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| U0N78_RS00765 (U0N78_00765) | comYC | 127885..128166 (+) | 282 | WP_043026803.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| U0N78_RS00770 (U0N78_00770) | comGD | 128147..128554 (+) | 408 | WP_043026801.1 | competence type IV pilus minor pilin ComGD | - |
| U0N78_RS00775 (U0N78_00775) | comGE | 128598..128735 (+) | 138 | Protein_118 | competence system putative prepilin ComGE | - |
| U0N78_RS00780 (U0N78_00780) | comGF/cglF | 128805..129239 (+) | 435 | WP_043026797.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| U0N78_RS00785 (U0N78_00785) | comGG | 129217..129744 (+) | 528 | WP_043026795.1 | competence type IV pilus minor pilin ComGG | - |
| U0N78_RS00790 (U0N78_00790) | comYH | 129801..130754 (+) | 954 | WP_043026794.1 | class I SAM-dependent methyltransferase | Machinery gene |
| U0N78_RS00795 (U0N78_00795) | - | 130805..131992 (+) | 1188 | WP_043026792.1 | acetate kinase | - |
| U0N78_RS00800 (U0N78_00800) | - | 132307..132858 (+) | 552 | WP_043026790.1 | folate family ECF transporter S component | - |
| U0N78_RS00805 (U0N78_00805) | - | 132914..134170 (+) | 1257 | WP_256769122.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35723.73 Da Isoelectric Point: 4.3089
>NTDB_id=912564 U0N78_RS00790 WP_043026794.1 129801..130754(+) (comYH) [Streptococcus suis strain 2022WUSS148]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVADQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVATQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQIILADLPIGYYPDDQIASRYQVASSIEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQNFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVADQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVATQKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQIILADLPIGYYPDDQIASRYQVASSIEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQNFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=912564 U0N78_RS00790 WP_043026794.1 129801..130754(+) (comYH) [Streptococcus suis strain 2022WUSS148]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCTTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGATTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGGC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGATGATCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGCGATGCGGTACGTCCGCAGATTTTGAAGGAAAGCCAAATCATTCTTGCGGATTTGCCGATTGG
TTACTATCCAGATGATCAGATTGCTAGCCGTTATCAGGTCGCCAGTTCAATTGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTGCAAA
GTCTTCAAGAACCAGAAGCTATTCAGAACTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCTTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGATTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGGC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTGGATTACTTGGGGATCGAAGTGGATGATCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGCGATGCGGTACGTCCGCAGATTTTGAAGGAAAGCCAAATCATTCTTGCGGATTTGCCGATTGG
TTACTATCCAGATGATCAGATTGCTAGCCGTTATCAGGTCGCCAGTTCAATTGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGCTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTGCAAA
GTCTTCAAGAACCAGAAGCTATTCAGAACTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
60.443 |
99.685 |
0.603 |
| comYH | Streptococcus mutans UA140 |
60.127 |
99.685 |
0.599 |