Detailed information NTG0912451

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: SPI00_RS03020
• Genome accession: NZ_CP140096
• Coordinates: 370448..372598 (+)
• Length: 716 a.a.
• NCBI ID: WP_027821502.1
• Uniprot ID: L7ZAH2
• Organism: Lactiplantibacillus plantarum strain J50
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 365448..377598

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPI00_RS02990 (SPI00_03000)	-	366393..366566 (+)	174	WP_154766382.1	hypothetical protein	-
SPI00_RS02995 (SPI00_03005)	-	366579..367919 (+)	1341	WP_063722877.1	sensor histidine kinase	-
SPI00_RS03000 (SPI00_03010)	-	367920..368663 (+)	744	WP_015825122.1	response regulator transcription factor	-
SPI00_RS03005 (SPI00_03015)	-	368957..369730 (-)	774	WP_099738701.1	CPBP family intramembrane glutamic endopeptidase	-
SPI00_RS03010 (SPI00_03020)	plnF	369829..369987 (-)	159	WP_027822764.1	two-peptide bacteriocin plantaricin EF subunit PlnF	-
SPI00_RS03015 (SPI00_03025)	plnE	370012..370182 (-)	171	WP_003641985.1	two-peptide bacteriocin plantaricin EF subunit PlnE	-
SPI00_RS03020 (SPI00_03030)	comA	370448..372598 (+)	2151	WP_027821502.1	peptide cleavage/export ABC transporter	Regulator
SPI00_RS03025 (SPI00_03035)	-	372615..373991 (+)	1377	WP_027821501.1	HlyD family secretion protein	-
SPI00_RS03030 (SPI00_03040)	-	374081..374770 (+)	690	WP_322436456.1	type II CAAX endopeptidase family protein	-
SPI00_RS03035 (SPI00_03045)	-	374838..375506 (+)	669	WP_027822761.1	CPBP family intramembrane glutamic endopeptidase	-
SPI00_RS03040 (SPI00_03050)	-	375593..376273 (+)	681	WP_027822760.1	CPBP family intramembrane glutamic endopeptidase	-
SPI00_RS03045 (SPI00_03055)	-	376367..377041 (+)	675	WP_027822759.1	CPBP family intramembrane glutamic endopeptidase	-
SPI00_RS03050 (SPI00_03060)	-	377189..377479 (+)	291	WP_027822758.1	type II toxin-antitoxin system RelE/ParE family toxin	-

Sequence

Protein

• Length: 716 a.a.
• Molecular weight: 79956.67 Da
• Isoelectric Point: 6.6530

>NTDB_id=912451 SPI00_RS03020 WP_027821502.1 370448..372598(+) (comA) [Lactiplantibacillus plantarum strain J50]
MHWRNYVAQVDEMDCGVAALAMILKNYGSTTSLAYLRNIAKTSLEGTTALGLVKTAEKLGFETKAIQADMSLFDVQDLPL
PFIVHVTKNGDLQHFYVVVKTSKTHVVIADPDPTVAVISMSKERFESEWSGVALFFAPKSEYKPVKQDKGSLWGFIPSLL
KQRRLVINIVLAAVLITIISICGSYFLQAVIDTYIPNNMHSTLAVVAIGLIVFYTFQAIFTYAQNFLLAVLGQRLSIEII
LGYIRHVFELPMSFFATRRTGEIVSRFTDASKIIDALASTIVSLFLDVSIVIIMGAILVIQNMTLFWITLLSLPIYAVVI
LAFNKSFERLNQKEMESNAILSSAIIEDLHGIETVKALNGETERYQKIDSEFVDYLRKSLAYLKADTLQQALKLFIQLVL
EVVVLWVGANLVIHNQLSVGELMTYNALLAYFVNPLQNIINLQTKLQSAKVANNRLNEVYLVASEFEASRPIHNESQLNG
DIKLQGVSYRYGYGENVLDDVNLTIRQHDKVAIVGMSGSGKSTLVKLLIDFYQPNSGDVMLNGFNVKNIDKHTLRTHINY
IPQEPYIFSATIEENLRLGNRSGITEKDIAKACQLALIDTDINKMAMQYQTKLDENGNTLSGGQRQRLTIARALLSPAQV
LIFDESTSGLDAITEKQLIDNLVAMTDKTIIFIAHRLSIAKRTNHIIVLHDGRVAEEGTHAALLNEHGYYYDLINS

Nucleotide

• Length: 2151 bp

>NTDB_id=912451 SPI00_RS03020 WP_027821502.1 370448..372598(+) (comA) [Lactiplantibacillus plantarum strain J50]
ATGCATTGGAGAAACTATGTTGCGCAAGTTGACGAGATGGACTGTGGGGTCGCAGCTTTAGCAATGATTTTGAAAAATTA
TGGTTCGACAACATCATTGGCCTATCTAAGAAATATTGCTAAAACGAGTTTAGAAGGGACTACGGCATTAGGATTAGTAA
AAACGGCCGAAAAGTTAGGTTTTGAAACCAAAGCAATTCAAGCAGATATGAGTCTTTTCGATGTCCAAGATTTACCATTG
CCATTCATTGTGCATGTTACCAAAAATGGGGATCTACAGCATTTTTATGTTGTTGTAAAAACCTCGAAAACGCATGTCGT
GATTGCTGATCCGGACCCAACAGTTGCGGTTATCAGTATGTCAAAGGAACGGTTTGAAAGCGAATGGTCCGGAGTTGCCC
TTTTCTTTGCACCGAAGTCGGAATATAAGCCAGTTAAGCAAGATAAGGGCTCACTATGGGGATTTATTCCAAGCTTATTA
AAGCAGCGCCGACTGGTTATTAATATTGTGCTTGCTGCAGTTTTAATCACGATTATTAGTATCTGTGGGTCTTATTTCTT
ACAAGCGGTGATTGATACTTATATTCCTAATAATATGCACAGTACATTGGCAGTGGTGGCAATTGGTCTAATCGTTTTTT
ATACCTTTCAGGCTATCTTTACTTATGCCCAGAATTTTTTATTGGCGGTTTTAGGTCAACGACTTTCGATTGAAATTATT
TTAGGCTATATTCGGCACGTCTTTGAATTGCCAATGAGTTTTTTTGCCACTCGGCGGACGGGGGAAATTGTTTCAAGGTT
TACGGATGCCAGTAAGATTATTGATGCGTTAGCTAGCACAATTGTTTCGCTGTTTTTAGATGTCAGCATCGTTATTATTA
TGGGGGCAATCTTGGTAATCCAGAATATGACACTTTTTTGGATTACGTTACTCTCGTTGCCAATCTACGCGGTTGTCATC
TTAGCCTTTAATAAATCCTTTGAACGATTGAATCAAAAGGAAATGGAAAGCAATGCTATTTTGAGTTCAGCCATTATTGA
GGATCTTCATGGGATTGAAACTGTTAAGGCGCTGAATGGTGAGACGGAACGTTATCAGAAAATTGATTCAGAATTTGTTG
ATTATCTACGTAAGAGTTTAGCCTATCTTAAAGCGGATACTTTGCAACAGGCATTAAAACTGTTTATACAGTTAGTCTTA
GAAGTTGTTGTTCTATGGGTGGGCGCCAATCTCGTCATTCATAATCAGTTATCAGTTGGAGAGCTCATGACATATAATGC
TTTATTAGCCTATTTTGTTAATCCACTACAGAATATTATTAATTTGCAGACTAAGCTTCAAAGCGCTAAGGTCGCTAACA
ACCGGTTAAATGAAGTGTATTTGGTCGCTAGTGAATTTGAGGCGTCACGGCCAATTCATAATGAAAGTCAATTAAATGGT
GATATTAAGTTACAAGGGGTCAGCTATCGTTATGGTTACGGTGAAAATGTCTTAGATGATGTTAATTTGACGATTCGACA
ACATGATAAGGTTGCAATTGTGGGGATGAGTGGCTCTGGCAAGTCCACGTTAGTTAAATTGCTTATTGATTTTTATCAGC
CGAATAGTGGTGATGTCATGCTGAACGGCTTCAACGTTAAGAACATCGATAAGCATACATTGCGGACCCATATTAACTAC
ATCCCGCAGGAGCCATACATCTTTTCAGCGACCATTGAAGAAAATTTAAGATTAGGTAATCGCAGCGGTATTACTGAGAA
AGATATTGCGAAGGCTTGCCAATTGGCGTTAATTGATACAGATATTAATAAAATGGCCATGCAATACCAAACTAAGCTAG
ATGAGAATGGTAATACACTATCAGGTGGTCAGCGACAACGATTAACGATTGCGAGAGCGTTATTATCTCCCGCTCAAGTC
TTGATATTTGATGAGTCGACGAGTGGACTGGATGCAATTACTGAGAAACAATTAATCGATAATTTAGTGGCAATGACTGA
CAAGACGATTATTTTTATTGCCCACCGGCTGTCGATTGCAAAGCGGACGAATCATATCATCGTTCTGCATGATGGTCGGG
TCGCTGAAGAGGGGACCCATGCGGCATTGTTGAATGAACATGGTTACTATTACGACTTGATCAATAGCTGA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (5-140)

• ABC transporter transmembrane region (ABC_membrane) (166-436)

• ABC transporter (ABC_tran) (498-648)

3D structure

• AlphaFold DB: L7ZAH2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	59.046	99.581	0.588
comA	Streptococcus pneumoniae Rx1	58.766	99.581	0.585
comA	Streptococcus pneumoniae D39	58.766	99.581	0.585
comA	Streptococcus pneumoniae R6	58.766	99.581	0.585
comA	Streptococcus pneumoniae TIGR4	58.626	99.581	0.584
comA	Streptococcus mitis SK321	58.485	99.581	0.582
comA	Streptococcus gordonii str. Challis substr. CH1	57.242	100	0.574
comA/nlmT	Streptococcus mutans UA159	54.735	100	0.549