Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | L6419_RS08045 | Genome accession | NZ_AP025332 |
| Coordinates | 1699098..1699589 (-) | Length | 163 a.a. |
| NCBI ID | WP_024533052.1 | Uniprot ID | A0A2Z5TQ12 |
| Organism | Streptococcus ruminantium strain GUT-184 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1694098..1704589
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6419_RS08030 (GUT184_15460) | - | 1695020..1695673 (+) | 654 | WP_155964289.1 | DUF1129 domain-containing protein | - |
| L6419_RS08035 (GUT184_15470) | - | 1695845..1698352 (-) | 2508 | WP_237375293.1 | pneumococcal-type histidine triad protein | - |
| L6419_RS08040 (GUT184_15480) | rpsR | 1698708..1698947 (-) | 240 | WP_002939250.1 | 30S ribosomal protein S18 | - |
| L6419_RS08045 (GUT184_15490) | ssbA | 1699098..1699589 (-) | 492 | WP_024533052.1 | single-stranded DNA-binding protein | Machinery gene |
| L6419_RS08050 (GUT184_15500) | rpsF | 1699601..1699891 (-) | 291 | WP_024533051.1 | 30S ribosomal protein S6 | - |
| L6419_RS08055 (GUT184_15510) | - | 1700050..1701039 (-) | 990 | WP_024533050.1 | lipoate--protein ligase | - |
| L6419_RS08060 (GUT184_15520) | - | 1701122..1702561 (-) | 1440 | WP_120172126.1 | 6-phospho-beta-glucosidase | - |
| L6419_RS08065 (GUT184_15530) | - | 1702616..1703221 (-) | 606 | WP_237375294.1 | histidine phosphatase family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18098.83 Da Isoelectric Point: 4.7294
>NTDB_id=91200 L6419_RS08045 WP_024533052.1 1699098..1699589(-) (ssbA) [Streptococcus ruminantium strain GUT-184]
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINVVIWRQQAENLANWAKKGALIGVTGRIQTR
SYDNQQGQRVYVTEVVAESFQLLESRSVREGQGGYSTGSSFAGGNDYNSSYQAPSQSTPNFAREESPFGTSNPMDISDDD
LPF
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINVVIWRQQAENLANWAKKGALIGVTGRIQTR
SYDNQQGQRVYVTEVVAESFQLLESRSVREGQGGYSTGSSFAGGNDYNSSYQAPSQSTPNFAREESPFGTSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=91200 L6419_RS08045 WP_024533052.1 1699098..1699589(-) (ssbA) [Streptococcus ruminantium strain GUT-184]
ATGATAAATAATGTAGTATTGGTTGGTCGTATGACCCGCGATGCAGAACTTCGTTACACCCCGTCTAATCAGGCTGTTGC
GACTTTTACTTTAGCGGTCAACCGTAATTTTAAAAATCAAAACGGTGAGCGTGAAGCGGACTTTATCAACGTAGTGATTT
GGCGCCAACAAGCTGAAAATTTGGCGAATTGGGCTAAGAAAGGTGCACTGATTGGTGTTACAGGTCGTATCCAGACCCGT
AGTTATGATAATCAACAAGGGCAACGTGTCTACGTTACAGAAGTCGTTGCAGAAAGTTTTCAACTTCTTGAGAGTCGCTC
TGTTCGTGAAGGACAAGGCGGTTATTCTACTGGTTCTTCATTTGCTGGGGGAAATGATTATAACTCATCTTATCAAGCAC
CATCACAATCTACACCGAACTTCGCTCGAGAAGAAAGTCCATTTGGGACAAGCAATCCGATGGACATATCAGACGATGAC
CTACCGTTCTAA
ATGATAAATAATGTAGTATTGGTTGGTCGTATGACCCGCGATGCAGAACTTCGTTACACCCCGTCTAATCAGGCTGTTGC
GACTTTTACTTTAGCGGTCAACCGTAATTTTAAAAATCAAAACGGTGAGCGTGAAGCGGACTTTATCAACGTAGTGATTT
GGCGCCAACAAGCTGAAAATTTGGCGAATTGGGCTAAGAAAGGTGCACTGATTGGTGTTACAGGTCGTATCCAGACCCGT
AGTTATGATAATCAACAAGGGCAACGTGTCTACGTTACAGAAGTCGTTGCAGAAAGTTTTCAACTTCTTGAGAGTCGCTC
TGTTCGTGAAGGACAAGGCGGTTATTCTACTGGTTCTTCATTTGCTGGGGGAAATGATTATAACTCATCTTATCAAGCAC
CATCACAATCTACACCGAACTTCGCTCGAGAAGAAAGTCCATTTGGGACAAGCAATCCGATGGACATATCAGACGATGAC
CTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.558 |
100 |
0.607 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
55.882 |
100 |
0.583 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.046 |
66.871 |
0.368 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
55.66 |
65.031 |
0.362 |