Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | SUT_RS08380 | Genome accession | NZ_AP025331 |
| Coordinates | 1770025..1770516 (-) | Length | 163 a.a. |
| NCBI ID | WP_024533052.1 | Uniprot ID | A0A2Z5TQ12 |
| Organism | Streptococcus ruminantium strain GUT-183 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1765025..1775516
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SUT_RS08365 (GUT183_16170) | - | 1765948..1766601 (+) | 654 | WP_155964289.1 | DUF1129 domain-containing protein | - |
| SUT_RS10390 | - | 1766773..1768155 (-) | 1383 | WP_419580034.1 | pneumococcal-type histidine triad protein | - |
| SUT_RS10395 | - | 1768152..1769280 (-) | 1129 | Protein_1621 | pneumococcal-type histidine triad protein | - |
| SUT_RS08375 (GUT183_16190) | rpsR | 1769635..1769874 (-) | 240 | WP_002939250.1 | 30S ribosomal protein S18 | - |
| SUT_RS08380 (GUT183_16200) | ssbA | 1770025..1770516 (-) | 492 | WP_024533052.1 | single-stranded DNA-binding protein | Machinery gene |
| SUT_RS08385 (GUT183_16210) | rpsF | 1770528..1770818 (-) | 291 | WP_024533051.1 | 30S ribosomal protein S6 | - |
| SUT_RS08390 (GUT183_16220) | - | 1770977..1771966 (-) | 990 | WP_120172124.1 | lipoate--protein ligase | - |
| SUT_RS08395 (GUT183_16230) | - | 1772049..1773488 (-) | 1440 | WP_156021666.1 | 6-phospho-beta-glucosidase | - |
| SUT_RS08400 (GUT183_16240) | - | 1773543..1774148 (-) | 606 | WP_155964292.1 | histidine phosphatase family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18098.83 Da Isoelectric Point: 4.7294
>NTDB_id=91147 SUT_RS08380 WP_024533052.1 1770025..1770516(-) (ssbA) [Streptococcus ruminantium strain GUT-183]
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINVVIWRQQAENLANWAKKGALIGVTGRIQTR
SYDNQQGQRVYVTEVVAESFQLLESRSVREGQGGYSTGSSFAGGNDYNSSYQAPSQSTPNFAREESPFGTSNPMDISDDD
LPF
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINVVIWRQQAENLANWAKKGALIGVTGRIQTR
SYDNQQGQRVYVTEVVAESFQLLESRSVREGQGGYSTGSSFAGGNDYNSSYQAPSQSTPNFAREESPFGTSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=91147 SUT_RS08380 WP_024533052.1 1770025..1770516(-) (ssbA) [Streptococcus ruminantium strain GUT-183]
ATGATAAATAATGTAGTATTGGTTGGTCGTATGACCCGCGATGCAGAACTTCGTTACACCCCGTCTAATCAGGCTGTTGC
GACTTTTACTTTAGCGGTCAACCGTAATTTTAAAAATCAAAACGGTGAGCGTGAAGCGGACTTTATCAACGTAGTGATTT
GGCGCCAACAAGCTGAAAATTTGGCGAATTGGGCTAAGAAAGGTGCACTGATTGGTGTTACAGGTCGTATCCAGACCCGT
AGTTATGATAATCAACAAGGGCAACGTGTCTACGTTACAGAAGTCGTTGCAGAAAGTTTTCAACTTCTTGAGAGTCGCTC
TGTTCGTGAAGGACAAGGCGGTTATTCTACTGGTTCTTCATTTGCTGGGGGAAATGATTATAACTCATCTTATCAAGCAC
CATCACAATCTACACCGAACTTCGCTCGAGAAGAAAGTCCATTTGGGACAAGCAATCCGATGGACATATCAGACGATGAC
CTACCGTTCTAA
ATGATAAATAATGTAGTATTGGTTGGTCGTATGACCCGCGATGCAGAACTTCGTTACACCCCGTCTAATCAGGCTGTTGC
GACTTTTACTTTAGCGGTCAACCGTAATTTTAAAAATCAAAACGGTGAGCGTGAAGCGGACTTTATCAACGTAGTGATTT
GGCGCCAACAAGCTGAAAATTTGGCGAATTGGGCTAAGAAAGGTGCACTGATTGGTGTTACAGGTCGTATCCAGACCCGT
AGTTATGATAATCAACAAGGGCAACGTGTCTACGTTACAGAAGTCGTTGCAGAAAGTTTTCAACTTCTTGAGAGTCGCTC
TGTTCGTGAAGGACAAGGCGGTTATTCTACTGGTTCTTCATTTGCTGGGGGAAATGATTATAACTCATCTTATCAAGCAC
CATCACAATCTACACCGAACTTCGCTCGAGAAGAAAGTCCATTTGGGACAAGCAATCCGATGGACATATCAGACGATGAC
CTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.558 |
100 |
0.607 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
55.882 |
100 |
0.583 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.046 |
66.871 |
0.368 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
55.66 |
65.031 |
0.362 |