Detailed information NTG0910980

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: HX0037_RS11940
• Genome accession: NZ_CP139782
• Coordinates: 2474838..2476001 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain HX0037
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2469838..2481001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HX0037_RS11920	tuaH	2470293..2471489 (+)	1197	WP_094247452.1	teichuronic acid biosynthesis protein TuaH	-
HX0037_RS11925	-	2471622..2472698 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
HX0037_RS11930	-	2472788..2473963 (-)	1176	WP_071392366.1	LCP family protein	-
HX0037_RS11935	-	2473968..2474615 (-)	648	WP_060657503.1	YigZ family protein	-
HX0037_RS11940	degS	2474838..2476001 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
HX0037_RS11945	degU	2476078..2476767 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
HX0037_RS11950	-	2476865..2477713 (+)	849	WP_003151387.1	DegV family protein	-
HX0037_RS11955	comFA	2477821..2479206 (+)	1386	WP_094247454.1	DEAD/DEAH box helicase	Machinery gene
HX0037_RS11960	-	2479264..2479548 (+)	285	WP_017418816.1	late competence development ComFB family protein	-
HX0037_RS11965	comFC	2479554..2480243 (+)	690	WP_202980098.1	phosphoribosyltransferase family protein	Machinery gene
HX0037_RS11970	-	2480317..2480736 (+)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=910980 HX0037_RS11940 WP_003151385.1 2474838..2476001(+) (degS) [Bacillus amyloliquefaciens strain HX0037]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=910980 HX0037_RS11940 WP_003151385.1 2474838..2476001(+) (degS) [Bacillus amyloliquefaciens strain HX0037]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948