Detailed information NTG0910983

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ABU997_RS07165
• Genome accession: NZ_CP159152
• Coordinates: 1171635..1172660 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 10035210-2
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1166635..1177660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABU997_RS07155 (ABU997_07160)	rpmE	1168866..1169078 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ABU997_RS07160 (ABU997_07165)	priA	1169281..1171479 (+)	2199	WP_001324365.1	primosomal protein N'	Machinery gene
ABU997_RS07165 (ABU997_07170)	cytR	1171635..1172660 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ABU997_RS07170 (ABU997_07175)	ftsN	1172752..1173711 (+)	960	WP_000068837.1	cell division protein FtsN	-
ABU997_RS07175 (ABU997_07180)	hslV	1173804..1174334 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ABU997_RS07180 (ABU997_07185)	hslU	1174344..1175675 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ABU997_RS07185 (ABU997_07190)	menA	1175742..1176668 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ABU997_RS07190 (ABU997_07195)	rraA	1176761..1177246 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ABU997_RS07195 (ABU997_07200)	zapB	1177331..1177576 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=910983 ABU997_RS07165 WP_000644904.1 1171635..1172660(+) (cytR) [Escherichia coli strain 10035210-2]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=910983 ABU997_RS07165 WP_000644904.1 1171635..1172660(+) (cytR) [Escherichia coli strain 10035210-2]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATTCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628