Detailed information NTG0910175

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: SD440_RS17725
• Genome accession: NZ_CP139561
• Coordinates: 3389262..3390437 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain NCCP
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3384262..3395437

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SD440_RS17690	-	3384438..3384857 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
SD440_RS17695	comFC	3384914..3385381 (-)	468	WP_038475569.1	ComF family protein	Machinery gene
SD440_RS17700	-	3385433..3385636 (-)	204	Protein_3433	hypothetical protein	-
SD440_RS17705	-	3385597..3385890 (-)	294	WP_008348267.1	competence protein ComFB	-
SD440_RS17710	comFA	3385955..3387028 (-)	1074	WP_345911145.1	helicase-related protein	Machinery gene
SD440_RS17715	-	3387454..3388296 (-)	843	WP_007499966.1	DegV family protein	-
SD440_RS17720	degU	3388508..3389197 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
SD440_RS17725	degS	3389262..3390437 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
SD440_RS17730	-	3390659..3391327 (+)	669	WP_017357860.1	YigZ family protein	-
SD440_RS17735	-	3391312..3392409 (+)	1098	WP_345911146.1	LCP family protein	-
SD440_RS17740	-	3392448..3393515 (-)	1068	WP_024719245.1	MraY family glycosyltransferase	-
SD440_RS17745	-	3393650..3394846 (-)	1197	WP_265153850.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=910175 SD440_RS17725 WP_003213166.1 3389262..3390437(-) (degS) [Bacillus altitudinis strain NCCP]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=910175 SD440_RS17725 WP_003213166.1 3389262..3390437(-) (degS) [Bacillus altitudinis strain NCCP]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTTAAGCAAATTAAACAGCAAG
TCAACGAAGTCATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGTTTATCTGAAGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGAATTTTTAGAGACCGTG
GAACAGAAGAAGGATTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841