Detailed information NTG0909022

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: SM130_RS03065
• Genome accession: NZ_CP139348
• Coordinates: 701508..702845 (-)
• Length: 445 a.a.
• NCBI ID: WP_102824358.1
• Uniprot ID: A0A2N8S4P9
• Organism: Stutzerimonas stutzeri strain KC
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 696508..707845

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SM130_RS03055 (SM130_03055)	-	698598..700193 (-)	1596	WP_102824356.1	PleD family two-component system response regulator	-
SM130_RS03060 (SM130_03060)	-	700408..701466 (+)	1059	WP_102824357.1	DUF2333 family protein	-
SM130_RS03065 (SM130_03065)	pilR	701508..702845 (-)	1338	WP_102824358.1	sigma-54 dependent transcriptional regulator	Regulator
SM130_RS03070 (SM130_03070)	pilS	702979..704571 (-)	1593	WP_102824359.1	ATP-binding protein	Regulator
SM130_RS03075 (SM130_03075)	-	704561..704791 (-)	231	WP_102824360.1	PP0621 family protein	-
SM130_RS03080 (SM130_03080)	-	704910..705899 (-)	990	WP_102824361.1	outer membrane protein assembly factor BamD	-
SM130_RS03085 (SM130_03085)	rluD	706106..707080 (+)	975	WP_102824362.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
SM130_RS03090 (SM130_03090)	pgeF	707077..707814 (+)	738	WP_256044870.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49609.17 Da
• Isoelectric Point: 6.4103

>NTDB_id=909022 SM130_RS03065 WP_102824358.1 701508..702845(-) (pilR) [Stutzerimonas stutzeri strain KC]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARECLAREHYDLCLTDMRLPDGSGLELVQYIQQQHPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAEVPVDSRLLGSSPPMKVLRKQIGKLARSQAPVY
ISGESGSGKELVSRLIHEQGPRNEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLAAEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADAM
LRRLAQECGDSVARLHPEALTKLENYRFPGNVRELENMLERAYTLCDGDEIKAGDLRLADCPGLSENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=909022 SM130_RS03065 WP_102824358.1 701508..702845(-) (pilR) [Stutzerimonas stutzeri strain KC]
ATGACCGCGCGCCAGAAAGCACTGATCATCGACGACGAGCCTGATATCCGCGAGCTGCTGGAAATCACCCTCGGCCGCAT
GAAGCTCGATACGCGCAGCGCGCGCAACCTCAAGGAAGCGCGCGAATGCCTGGCCCGAGAGCACTATGACCTGTGTCTGA
CCGACATGCGCCTGCCCGATGGCAGCGGTCTGGAGCTCGTGCAGTACATCCAGCAGCAGCATCCGCAACTGCCCGTTGCC
ATGATCACCGCTTACGGAAGCCTGGACACGGCGATCGGCGCGCTCAAGGCCGGCGCATTCGACTTCCTCACCAAGCCCGT
GGACCTCAATCGTCTGCGCGAGCTGGTCAGTACTGCATTGCGTCTGCGTGCTCCGGCCGCGGAAGTGCCGGTGGACAGCC
GCCTGCTGGGAAGCTCACCGCCGATGAAGGTGCTGCGCAAGCAGATCGGAAAGCTAGCTCGTAGCCAGGCACCGGTCTAT
ATCAGCGGCGAGTCCGGAAGCGGGAAGGAGCTTGTGTCCCGCCTGATCCATGAACAAGGCCCGCGTAATGAAAAGCCCTT
CGTGCCGGTCAACTGCGGCGCAATCCCTTCCGAGCTGATGGAGAGTGAGTTTTTCGGCCATAAGAAAGGCAGCTTCAGTG
GCGCCATCGAAGACAAGCCAGGTCTGTTTCAGGCAGCCAACGGCGGCACGCTGTTTCTCGACGAGGTAGCCGATCTGCCG
CTACCGATGCAGGTCAAGCTGCTGCGTGCCATTCAGGAGAAGGCGGTCCGAGCGGTGGGCGGCGCGCAAGAAGTGATGGT
TGACGTCCGCATCCTCTGCGCGACGCACAAGGATCTGGCCGCCGAGGTTGCGGCGGGTCGCTTCCGTCAGGATCTGTACT
ACCGACTGAACGTCATCGAATTGCGCGTACCACCACTACGCGAGCGCCGCGAGGACATTGGCCTTCTCGCCGACGCCATG
CTCCGTCGCCTGGCTCAGGAGTGTGGCGACAGCGTCGCTCGCCTGCATCCGGAGGCCTTGACCAAGCTGGAGAACTACCG
TTTCCCTGGGAACGTGCGCGAACTGGAGAATATGCTTGAGCGCGCCTATACGCTCTGCGATGGCGACGAGATCAAAGCGG
GAGACTTGCGACTTGCCGATTGCCCTGGTCTGTCGGAAAACGGTGAAGCCAGTCTGGCGCAGATCGACAATCTGGAGGAT
CACCTGGAAGAGATCGAACGTAAGTTGATCATGCAGGCGCTCGAAGAGACTCGCTGGAACCGCACAGCAGCGGCCCAGCG
GCTCGGCCTGACCTTCCGCTCGATGCGCTATCGACTGAAAAAGCTCGGCCTGGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

3D structure

• AlphaFold DB: A0A2N8S4P9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.36	99.775	0.852
pilR	Acinetobacter baumannii strain A118	49.455	100	0.51
luxO	Vibrio cholerae strain A1552	37.808	100	0.38