Detailed information NTG0908774

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: SOI81_RS15780
• Genome accession: NZ_CP139286
• Coordinates: 3350904..3351764 (+)
• Length: 286 a.a.
• NCBI ID: WP_320540987.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain AbaK
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3345904..3356764

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI81_RS15760 (SOI81_15760)	secG	3346510..3346839 (-)	330	WP_016142373.1	preprotein translocase subunit SecG	-
SOI81_RS15765 (SOI81_15765)	tpiA	3346852..3347646 (-)	795	WP_016142374.1	triose-phosphate isomerase	-
SOI81_RS15770 (SOI81_15770)	pilB	3347938..3349650 (+)	1713	WP_320540985.1	type IV-A pilus assembly ATPase PilB	Machinery gene
SOI81_RS15775 (SOI81_15775)	pilC	3349678..3350904 (+)	1227	WP_320540986.1	type II secretion system F family protein	Machinery gene
SOI81_RS15780 (SOI81_15780)	pilD	3350904..3351764 (+)	861	WP_320540987.1	A24 family peptidase	Machinery gene
SOI81_RS15785 (SOI81_15785)	coaE	3351766..3352362 (+)	597	WP_062849621.1	dephospho-CoA kinase	-
SOI81_RS15790 (SOI81_15790)	-	3352359..3353273 (-)	915	WP_016142379.1	DMT family transporter	-
SOI81_RS15795 (SOI81_15795)	rlmB	3353309..3354058 (-)	750	WP_005079348.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
SOI81_RS15800 (SOI81_15800)	-	3354161..3354487 (-)	327	WP_004795031.1	pyrimidine/purine nucleoside phosphorylase	-
SOI81_RS15805 (SOI81_15805)	-	3354564..3355874 (-)	1311	WP_320540988.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32163.51 Da
• Isoelectric Point: 6.6117

>NTDB_id=908774 SOI81_RS15780 WP_320540987.1 3350904..3351764(+) (pilD) [Acinetobacter pittii strain AbaK]
MQDIIAYFIQNLSALYIAVALVSLCIGSFLNVVIYRTPKMMEQDWQQECQMLLNPEQPIIEHEKLTLSKPASSCPECHQP
IHWYQNIPVISWLMLRGKCGHCQHPISIRYPAVELLTMLCSLVVVMVFGPTLQMLWGLVLTWTLIALTFIDFDTQLLPDR
FTLPLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=908774 SOI81_RS15780 WP_320540987.1 3350904..3351764(+) (pilD) [Acinetobacter pittii strain AbaK]
ATGCAAGACATCATTGCGTATTTTATTCAAAACTTATCTGCACTCTATATTGCAGTTGCACTCGTGAGCCTATGTATTGG
TAGCTTCTTGAATGTGGTGATTTATCGCACCCCAAAAATGATGGAACAAGATTGGCAGCAAGAATGTCAAATGTTGCTTA
ATCCTGAGCAACCCATCATTGAGCATGAAAAACTAACATTAAGTAAACCTGCTTCATCATGTCCAGAGTGCCATCAACCT
ATCCATTGGTATCAAAATATTCCTGTCATAAGCTGGTTGATGTTAAGAGGAAAATGTGGTCATTGCCAGCATCCTATTAG
CATTCGTTATCCAGCGGTTGAACTACTCACCATGCTATGTTCATTGGTAGTCGTCATGGTGTTTGGCCCAACCCTACAAA
TGCTTTGGGGGTTAGTACTCACTTGGACCTTAATTGCTTTGACATTTATAGACTTTGATACTCAGCTGCTCCCCGACCGT
TTTACCTTGCCTTTGGCTGCACTCGGCTTAGGCATTAACACCTTTAATATTTATACCTCGCCTAACTCAGCTATTTGGGG
ATATTTAATCGGTTTTTTATGCCTTTGGATTGTTTATTACTTATTTAAAGTGATTACAGGCAAAGAAGGTATGGGCTACG
GCGACTTTAAATTGCTTGCTGCCTTAGGCGCATGGATGGGGCCATTGATGCTGCCATTAATTGTGCTATTGTCATCTTTA
CTAGGTGCAATTATTGGCATCATTTTATTAAAGTTACGTAATGACAATCAGCCCTTTGCTTTTGGGCCCTATATTGCCAT
TGCGGGTTGGGTTGCCTTTTTATGGGGTGACCAGATTATGAAAATTTATTTGGGAGGTTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (22-128)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	96.154	100	0.962
pilD	Acinetobacter baumannii D1279779	95.804	100	0.958
pilD	Vibrio cholerae strain A1552	52.574	95.105	0.5
pilD	Vibrio campbellii strain DS40M4	51.825	95.804	0.497
pilD	Neisseria gonorrhoeae MS11	46.183	91.608	0.423