Detailed information NTG0090848

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: NC3_RS16380
• Genome accession: NZ_AP025264
• Coordinates: 3185400..3186575 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain NC3
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3180400..3191575

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NC3_RS16350 (NC3_31750)	-	3180576..3180995 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
NC3_RS16355 (NC3_31760)	comFC	3181052..3181738 (-)	687	WP_182488940.1	ComF family protein	Machinery gene
NC3_RS16360 (NC3_31770)	-	3181735..3182028 (-)	294	WP_099496873.1	late competence development ComFB family protein	-
NC3_RS16365 (NC3_31780)	comFA	3182093..3183472 (-)	1380	WP_157774431.1	DEAD/DEAH box helicase	Machinery gene
NC3_RS16370 (NC3_31790)	-	3183592..3184434 (-)	843	WP_007499966.1	DegV family protein	-
NC3_RS16375 (NC3_31800)	degU	3184646..3185335 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
NC3_RS16380 (NC3_31810)	degS	3185400..3186575 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
NC3_RS16385 (NC3_31820)	-	3186797..3187465 (+)	669	WP_017357860.1	YigZ family protein	-
NC3_RS16390 (NC3_31830)	-	3187450..3188547 (+)	1098	WP_007499958.1	LCP family protein	-
NC3_RS16395 (NC3_31840)	-	3188585..3189652 (-)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
NC3_RS16400 (NC3_31850)	tuaH	3189787..3191034 (-)	1248	WP_236797722.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=90848 NC3_RS16380 WP_003213166.1 3185400..3186575(-) (degS) [Bacillus altitudinis strain NC3]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=90848 NC3_RS16380 WP_003213166.1 3185400..3186575(-) (degS) [Bacillus altitudinis strain NC3]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTCATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGATGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATAGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATAATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCTTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841