Detailed information NTG0908361

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: SOI72_RS01510
• Genome accession: NZ_CP139255
• Coordinates: 316139..317197 (+)
• Length: 352 a.a.
• NCBI ID: WP_005067078.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain MCR16048
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 311139..322197

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SOI72_RS01495 (SOI72_01495)	-	312200..312532 (+)	333	WP_005804527.1	hypothetical protein	-
SOI72_RS01500 (SOI72_01500)	rrmA	312535..313359 (+)	825	WP_005078486.1	putative RNA methyltransferase	-
SOI72_RS01505 (SOI72_01505)	ponA	313416..315977 (-)	2562	WP_005804528.1	penicillin-binding protein PBP1a	-
SOI72_RS01510 (SOI72_01510)	pilM	316139..317197 (+)	1059	WP_005067078.1	pilus assembly protein PilM	Machinery gene
SOI72_RS01515 (SOI72_01515)	pilN	317197..317838 (+)	642	WP_005804530.1	PilN domain-containing protein	Machinery gene
SOI72_RS01520 (SOI72_01520)	pilO	317835..318614 (+)	780	WP_005804531.1	type 4a pilus biogenesis protein PilO	Machinery gene
SOI72_RS01525 (SOI72_01525)	pilP	318626..319153 (+)	528	WP_005804532.1	pilus assembly protein PilP	Machinery gene
SOI72_RS01530 (SOI72_01530)	pilQ	319216..321381 (+)	2166	WP_002116833.1	type IV pilus secretin PilQ	Machinery gene
SOI72_RS01535 (SOI72_01535)	aroK	321393..321962 (+)	570	WP_002116987.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39068.65 Da
• Isoelectric Point: 4.4657

>NTDB_id=908361 SOI72_RS01510 WP_005067078.1 316139..317197(+) (pilM) [Acinetobacter pittii strain MCR16048]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPHTTNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=908361 SOI72_RS01510 WP_005067078.1 316139..317197(+) (pilM) [Acinetobacter pittii strain MCR16048]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTAACGCCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAAGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCACACCACTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAACGATGATGAACGTGAAGTTCAGAT
TCGATTAGATGCGGAGCAATATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CGAATCCAAATCGTGTGAATGTACTTTTAGTCGCAACACGAACAGAAAATGTTGAAACACGCGTAGAAGTACTGGAACTG
GTTGATTTAACGCCTAAGCTTGCTGATGTTGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTGTTTGCTGATAGCTTACC
CATGGGTGCAAATACCATTGGTATTTTAGATATTGGCCATACCATGACCACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACCCGTGAACAAGTCTTTGGCGGTAAACAGCTTACTTTGGAAATTCAAAGCCGTTACGGTTTGTCATTAGAAGAA
GCGGGACGCGCTAAAAAAGAACGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTTTAGATGCTGTAGT
TCAGCAAGCTGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATTGACCATATTTTGCTAGCGGGTG
GCAATGCCAACATTCCAGGGCTTGCTAAATTGTTGCAGCAGAAACTCGGTTACCGAGTCACTATTGCCAATCCATTTTTA
CAAATGGGTTTCTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCTTCATTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	96.307	100	0.963
comM	Acinetobacter nosocomialis M2	96.307	100	0.963
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42