Detailed information NTG0908085

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: SON02_RS09120
• Genome accession: NZ_CP139211
• Coordinates: 2090803..2093040 (+)
• Length: 745 a.a.
• NCBI ID: WP_135027225.1
• Uniprot ID: -
• Organism: Streptococcus sp. LysM4
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2085803..2098040

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SON02_RS09090 (SON02_09070)	-	2086778..2087293 (+)	516	WP_135027232.1	isoprenylcysteine carboxyl methyltransferase family protein	-
SON02_RS09095 (SON02_09075)	-	2087739..2088146 (+)	408	WP_135027377.1	GNAT family N-acetyltransferase	-
SON02_RS09100 (SON02_09080)	-	2088260..2088517 (-)	258	WP_135027375.1	GIY-YIG nuclease family protein	-
SON02_RS09105 (SON02_09085)	-	2088525..2089274 (-)	750	WP_135027230.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
SON02_RS09110 (SON02_09090)	-	2089370..2090116 (+)	747	WP_135027229.1	lysophospholipid acyltransferase family protein	-
SON02_RS09115 (SON02_09095)	comEA/celA/cilE	2090181..2090819 (+)	639	WP_135027227.1	helix-hairpin-helix domain-containing protein	Machinery gene
SON02_RS09120 (SON02_09100)	comEC/celB	2090803..2093040 (+)	2238	WP_135027225.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
SON02_RS09125 (SON02_09105)	-	2093745..2095268 (+)	1524	WP_135027223.1	AMP-binding protein	-
SON02_RS09130 (SON02_09110)	holA	2095448..2096479 (+)	1032	WP_135027221.1	DNA polymerase III subunit delta	-
SON02_RS09135	-	2096573..2097045 (-)	473	Protein_1757	IS630 family transposase	-
SON02_RS09140 (SON02_09120)	-	2097083..2097409 (-)	327	WP_306299843.1	IS630 transposase-related protein	-
SON02_RS09145 (SON02_09125)	-	2097638..2097838 (+)	201	WP_135029514.1	hypothetical protein	-

Sequence

Protein

• Length: 745 a.a.
• Molecular weight: 85438.58 Da
• Isoelectric Point: 9.3994

>NTDB_id=908085 SON02_RS09120 WP_135027225.1 2090803..2093040(+) (comEC/celB) [Streptococcus sp. LysM4]
MSQLIKGLPLTPIHLAVLLLALYFVMHHLSFLSMVILVAMLLLLYFQQGKMIVYKVLPILACFFLLFGLQRMKVAMDAAS
TLTEISYLDVKPDTIHINGDSLSFRARSSGYRYMVFYQLKSQREQVYFKSLSHLVRLEVEATVSVPESQRNFNGFDYQDY
LGTQEIYRTVKISQIKKIAQQTSWNPLDWLSLLRRKLLVYIKEHFPNPMRHYMTGLLLGDLDKEFEQMSDLYSSLGIIHL
FALSGMQVGFFVDRFRSFFLRFGIRKEIVDWLQLPFAFIYASLTGFSVSVNRSLLQRILSNMGMSKLDNIACTIILSFLI
MPHFLLTVGGVLSFAYAFLLAVFDFEDLAAYKRVAVESLAISLAMFPLLIYYFYSFQPLSILLTFLFSFLFDLVLLPGLS
LVFLLSPLMKLTQVNALFVWLEACIRWIVDLDLKPLIFGKPTVVLLLILLLILLSLYDLYRNWKWCWGLISLLALLVFIV
KYPLENEVTVVDVGQGDSIFLRDIRGRTVLIDVGGRVNVATKEVWQQGTNQANAKRTLLPYLRSRGVSRIDYLILTHAHT
DHMGDLLEVVREMAIGRIYISEGSASSQKLAEILQSVKVRPHLVKVGDTIPIGDGFLHVLYPYQKGDGGNDDSVVLYGEF
LQTRFLFTGDLEDSELELMKQYPQLSVDVLKVGHHGSKGSSHPEFLAAISPRIALISVGKNNRYKHPHQETLTRFQERQI
QVFRTDEQGAIRFRGWRKWKIETVR

Nucleotide

• Length: 2238 bp

>NTDB_id=908085 SON02_RS09120 WP_135027225.1 2090803..2093040(+) (comEC/celB) [Streptococcus sp. LysM4]
ATGTCACAGTTGATTAAAGGTCTGCCCCTTACTCCCATCCACTTGGCTGTCTTGTTACTAGCCCTTTACTTTGTTATGCA
TCATTTGTCCTTCTTATCAATGGTGATTTTGGTGGCAATGTTACTTCTTCTCTATTTTCAGCAAGGGAAGATGATAGTTT
ATAAGGTGCTTCCTATCTTAGCCTGTTTTTTTCTCCTATTTGGCCTGCAACGTATGAAAGTGGCAATGGATGCTGCATCT
ACTCTGACAGAGATTAGCTACTTAGATGTCAAACCAGATACCATTCATATCAATGGTGACAGCCTTTCGTTTCGTGCAAG
ATCGTCAGGATATCGGTATATGGTTTTTTACCAATTAAAAAGTCAAAGGGAGCAGGTTTACTTCAAAAGTCTGTCGCATC
TGGTGAGGCTAGAGGTGGAAGCGACTGTATCTGTCCCAGAAAGTCAGCGGAATTTTAATGGCTTTGATTACCAAGATTAC
TTGGGGACACAAGAGATTTATCGAACGGTCAAGATTAGTCAAATTAAGAAGATTGCCCAGCAGACTTCATGGAATCCTTT
GGACTGGCTCTCCTTACTTCGACGAAAGCTTTTAGTCTATATTAAGGAGCATTTTCCAAATCCAATGCGGCACTATATGA
CAGGGTTGTTGCTTGGAGATTTGGACAAGGAATTTGAGCAGATGAGCGATTTGTATTCTAGCCTAGGGATAATCCACTTA
TTTGCGCTTTCTGGTATGCAGGTTGGCTTCTTTGTAGATAGGTTCCGTTCCTTTTTCTTACGTTTCGGAATAAGAAAAGA
AATAGTTGATTGGCTACAGCTTCCGTTTGCCTTTATTTATGCAAGCTTGACAGGATTTTCAGTTTCAGTCAATCGTTCCC
TTTTGCAAAGGATTTTGAGCAATATGGGAATGAGTAAGTTAGATAATATAGCTTGTACGATTATCCTTTCTTTTCTAATC
ATGCCTCATTTTTTACTAACAGTAGGCGGTGTTCTGAGTTTTGCCTATGCTTTTTTATTGGCTGTTTTTGATTTTGAAGA
TTTGGCAGCTTATAAGCGAGTAGCTGTAGAAAGTTTAGCGATTTCTCTAGCTATGTTTCCCTTATTGATTTATTATTTTT
ACAGCTTTCAACCCTTATCTATTCTATTAACATTTCTCTTTTCCTTTCTTTTTGATCTAGTCTTGCTACCAGGCTTGAGC
CTTGTCTTTCTTCTTTCGCCGCTTATGAAGCTCACGCAAGTGAATGCTCTTTTTGTATGGTTAGAAGCCTGTATCCGGTG
GATAGTAGACTTGGACTTAAAACCATTGATTTTTGGGAAGCCGACAGTTGTTTTACTTCTAATCTTGCTGCTTATTTTGC
TCTCTTTGTATGATCTGTATCGGAATTGGAAATGGTGTTGGGGACTTATCAGCTTGTTAGCTCTGCTCGTTTTCATAGTC
AAATATCCCTTAGAAAATGAGGTGACAGTAGTGGATGTTGGGCAAGGGGATAGTATTTTTTTGAGAGATATACGAGGGCG
GACGGTCTTGATTGATGTAGGTGGTAGAGTGAATGTTGCTACAAAAGAAGTTTGGCAACAAGGGACAAATCAAGCGAATG
CGAAGCGAACGTTGCTCCCCTATCTTCGTAGTCGCGGTGTGAGTAGGATTGATTATCTAATCTTAACTCATGCCCATACG
GATCATATGGGAGATTTACTGGAAGTGGTGAGAGAAATGGCTATTGGTAGGATATATATTTCTGAGGGAAGTGCTAGCAG
TCAGAAATTAGCAGAGATCCTGCAGAGCGTAAAGGTGCGACCTCATCTTGTGAAAGTGGGAGATACTATTCCGATAGGTG
ACGGCTTTTTACATGTACTCTATCCTTATCAAAAAGGAGACGGTGGTAACGATGATTCGGTTGTGTTATATGGGGAGTTT
TTGCAGACTCGTTTTCTATTCACAGGGGATTTGGAAGATAGTGAGTTAGAGTTGATGAAACAGTATCCTCAGTTGTCTGT
TGATGTTTTAAAGGTAGGACATCATGGCTCGAAAGGTTCCTCTCATCCAGAATTTTTGGCTGCTATTTCTCCAAGGATTG
CCTTGATTTCAGTTGGGAAAAACAATCGTTACAAGCATCCGCATCAAGAAACTCTGACGCGTTTTCAAGAACGGCAGATC
CAGGTGTTTCGAACGGATGAACAAGGTGCTATTCGTTTCAGAGGTTGGAGGAAGTGGAAGATTGAAACGGTGAGATAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (216-458)

• Metallo-beta-lactamase superfamily (Lactamase_B) (492-699)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis SK321	51.004	100	0.511
comEC/celB	Streptococcus mitis NCTC 12261	49.866	100	0.499
comEC/celB	Streptococcus pneumoniae TIGR4	49.264	100	0.494
comEC/celB	Streptococcus pneumoniae Rx1	48.461	100	0.486
comEC/celB	Streptococcus pneumoniae D39	48.461	100	0.486
comEC/celB	Streptococcus pneumoniae R6	48.461	100	0.486
comEC	Lactococcus lactis subsp. cremoris KW2	45.332	99.195	0.45