Detailed information NTG0907968

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: SLQ83_RS14705
• Genome accession: NZ_CP139208
• Coordinates: 3047139..3048257 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347036.1
• Uniprot ID: A0A009PAD6
• Organism: Acinetobacter baumannii strain HNNY86G
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3042139..3053257

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SLQ83_RS14695 (SLQ83_14695)	-	3045255..3045947 (-)	693	WP_001108520.1	YggS family pyridoxal phosphate-dependent enzyme	-
SLQ83_RS14700 (SLQ83_14700)	pilT	3046074..3047111 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
SLQ83_RS14705 (SLQ83_14705)	pilU	3047139..3048257 (+)	1119	WP_000347036.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
SLQ83_RS14710 (SLQ83_14710)	fur	3048327..3048764 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
SLQ83_RS14715 (SLQ83_14715)	-	3048876..3049274 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
SLQ83_RS14720 (SLQ83_14720)	-	3049329..3049652 (-)	324	WP_000442584.1	RnfH family protein	-
SLQ83_RS14725 (SLQ83_14725)	-	3049652..3050719 (-)	1068	WP_029642282.1	membrane protein	-
SLQ83_RS14730 (SLQ83_14730)	-	3050872..3051327 (-)	456	WP_000782976.1	bacteriohemerythrin	-
SLQ83_RS14735 (SLQ83_14735)	-	3051580..3052428 (-)	849	WP_000336554.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41905.11 Da
• Isoelectric Point: 6.6944

>NTDB_id=907968 SLQ83_RS14705 WP_000347036.1 3047139..3048257(+) (pilU) [Acinetobacter baumannii strain HNNY86G]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=907968 SLQ83_RS14705 WP_000347036.1 3047139..3048257(+) (pilU) [Acinetobacter baumannii strain HNNY86G]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAATAGTCTTTCAGGCGAAGTAATTGGTCAACTATTACATTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTCGTAGGCGCGACAG
GTACAGGTAAATCCACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCCAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCTGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

3D structure

• AlphaFold DB: A0A009PAD6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.293	98.925	0.685
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.197	93.011	0.392