Detailed information NTG0907911

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: SLP98_RS04150
• Genome accession: NZ_CP139204
• Coordinates: 876637..877755 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347035.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain HNZZ130D
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 871637..882755

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SLP98_RS04120 (SLP98_04120)	-	872466..873314 (+)	849	WP_000336551.1	class II glutamine amidotransferase	-
SLP98_RS04125 (SLP98_04125)	-	873567..874022 (+)	456	WP_000782976.1	bacteriohemerythrin	-
SLP98_RS04130 (SLP98_04130)	-	874175..875242 (+)	1068	WP_005120426.1	hypothetical protein	-
SLP98_RS04135 (SLP98_04135)	-	875242..875565 (+)	324	WP_000442585.1	RnfH family protein	-
SLP98_RS04140 (SLP98_04140)	-	875620..876018 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
SLP98_RS04145 (SLP98_04145)	fur	876130..876567 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
SLP98_RS04150 (SLP98_04150)	pilU	876637..877755 (-)	1119	WP_000347035.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
SLP98_RS04155 (SLP98_04155)	pilT	877783..878820 (-)	1038	WP_114161343.1	type IV pilus twitching motility protein PilT	Machinery gene
SLP98_RS04160 (SLP98_04160)	-	878947..879639 (+)	693	WP_020752862.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41821.98 Da
• Isoelectric Point: 6.5675

>NTDB_id=907911 SLP98_RS04150 WP_000347035.1 876637..877755(-) (pilU) [Acinetobacter baumannii strain HNZZ130D]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFADTRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDSQ

Nucleotide

• Length: 1119 bp

>NTDB_id=907911 SLP98_RS04150 WP_000347035.1 876637..877755(-) (pilU) [Acinetobacter baumannii strain HNZZ130D]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAGAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCTCCCTC
TATGAAGATTAATGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTATTACATTCCA
TCATGAGCGAAAAACAACGCAAAGAATTTGCAGACACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGCCAGCTTTATATGGACTTGTCACTTAACTTAAAGGCTATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGAAAACAGCATTTAACTTTTGACAGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (34-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.661	100	0.769
pilU	Pseudomonas stutzeri DSM 10701	68.817	100	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.908	93.011	0.39