Detailed information NTG0906870

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: SH576_RS02110
• Genome accession: NZ_CP139036
• Coordinates: 455405..456553 (+)
• Length: 382 a.a.
• NCBI ID: WP_003110016.1
• Uniprot ID: A0A0H2ZL88
• Organism: Pseudomonas aeruginosa strain MAS152
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 450405..461553

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SH576_RS02085 (SH576_02085)	-	451556..451852 (-)	297	WP_031628111.1	DUF167 domain-containing protein	-
SH576_RS02090 (SH576_02090)	-	451849..452442 (-)	594	WP_003084544.1	YggT family protein	-
SH576_RS02095 (SH576_02095)	proC	452453..453274 (-)	822	WP_003084546.1	pyrroline-5-carboxylate reductase	-
SH576_RS02100 (SH576_02100)	-	453286..453978 (-)	693	WP_003084549.1	YggS family pyridoxal phosphate-dependent enzyme	-
SH576_RS02105 (SH576_02105)	pilT	454193..455227 (+)	1035	WP_003084552.1	type IV pilus twitching motility protein PilT	Machinery gene
SH576_RS02110 (SH576_02110)	pilU	455405..456553 (+)	1149	WP_003110016.1	type IV pilus ATPase PilU	Machinery gene
SH576_RS02115 (SH576_02115)	czcD	456561..457460 (-)	900	WP_003100957.1	CDF family zinc transporter CzcD	-
SH576_RS02120 (SH576_02120)	-	457615..458019 (+)	405	WP_003084560.1	NINE protein	-
SH576_RS02125 (SH576_02125)	-	458262..459635 (+)	1374	WP_004365040.1	pyridoxal-phosphate dependent enzyme	-
SH576_RS02130 (SH576_02130)	-	459632..460816 (+)	1185	WP_003110017.1	cystathionine gamma-synthase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 42559.83 Da
• Isoelectric Point: 6.7792

>NTDB_id=906870 SH576_RS02110 WP_003110016.1 455405..456553(+) (pilU) [Pseudomonas aeruginosa strain MAS152]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQRRDFAENHECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIED
PIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERI
IHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIRKGEVHELKPLMKRSTEQGMQTFDQA
LYQLYTQGEITYEDALAHADSANDLRLMIKLGSESDADHLSNLTQGLSLEITDDDPAGRRFR

Nucleotide

• Length: 1149 bp

>NTDB_id=906870 SH576_RS02110 WP_003110016.1 455405..456553(+) (pilU) [Pseudomonas aeruginosa strain MAS152]
ATGGAATTCGAAAAGCTGCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGACCTGTTCATCACCGCCGGCGTACCGCCGTC
GATGAAGGTCAACGGCCGGGTGATGCCGGTGACCAAGACGCCGCTGTCGCCGGAGCAGACCCGCGAGACCGTGCTAGGCG
TGATGAACGAGCAGCAGCGCCGCGATTTCGCCGAGAACCATGAGTGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGC
TTCCGGGTCAGTGCCTTCTACCAGCGCAACCTGGTGGGCATGGTATTGCGCCGGATCGAGACCAACATCCCGACCCTGGA
AGAGCTGAAGCTCCCGGAAATCCTCAAGAAGCTGGCGCTGACCAAGCGCGGCCTGGTGATCTTCGTCGGCGCCACCGGCA
CCGGCAAGTCCACCTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAACTCCACCGGGCACATCATCTCCATCGAGGAC
CCGATCGAGTACATCCACCAGCACCAGGGCTGCATCGTCACTCAGCGCGAGGTGGGGCTGGACACCGACTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCATGATCGGCGAGGTGCGCTCGCGGGAGACCATGGACCACG
CCGTGGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACCCTGCACGCGAACAACGCCAACCAGGCGCTGGAGCGGATC
ATCCACTTCTTCCCGGCCGACCGTCATGGCCAGGTGTGGATGGACCTGTCGCTGAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACCCCCGACGGCAAGGGGCGGCGGGCGGTGATCGAGGTGCTGCTGAACACCCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGGTACACGAGCTGAAGCCGCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGACCAGGCG
CTGTACCAGCTCTACACCCAGGGCGAGATAACCTACGAGGACGCCCTGGCCCACGCCGACTCGGCCAACGACCTGCGCCT
GATGATCAAGCTCGGTTCGGAAAGCGACGCCGACCACCTGTCGAACCTGACCCAGGGCCTGAGCCTGGAAATCACCGACG
ACGACCCTGCCGGCCGGCGCTTCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (111-270)

3D structure

• AlphaFold DB: A0A0H2ZL88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	88.22	100	0.882
pilU	Acinetobacter baylyi ADP1	65.266	93.455	0.61
pilU	Vibrio cholerae strain A1552	60.286	91.623	0.552
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.068	88.743	0.382