Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | SGW57_RS07030 | Genome accession | NZ_CP139025 |
| Coordinates | 1359448..1359951 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain DA70484 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1355388..1379070 | 1359448..1359951 | within | 0 |
Gene organization within MGE regions
Location: 1355388..1379070
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SGW57_RS07000 | - | 1355388..1356233 (+) | 846 | WP_001573568.1 | ParB/RepB/Spo0J family partition protein | - |
| SGW57_RS07005 | - | 1356387..1357268 (+) | 882 | WP_000373076.1 | mechanosensitive ion channel family protein | - |
| SGW57_RS07010 | - | 1357298..1357501 (+) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
| SGW57_RS07015 | ychF | 1357513..1358610 (+) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| SGW57_RS07020 | - | 1358696..1358887 (-) | 192 | WP_001052483.1 | hypothetical protein | - |
| SGW57_RS07025 | rpsF | 1359131..1359427 (+) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| SGW57_RS07030 | ssbA | 1359448..1359951 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| SGW57_RS07035 | rpsR | 1360003..1360245 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| SGW57_RS07040 | - | 1360477..1361196 (-) | 720 | WP_000400841.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| SGW57_RS07045 | - | 1361309..1362523 (-) | 1215 | WP_000270135.1 | site-specific integrase | - |
| SGW57_RS07050 | - | 1362684..1363307 (-) | 624 | WP_000230361.1 | helix-turn-helix transcriptional regulator | - |
| SGW57_RS07055 | - | 1363456..1363620 (+) | 165 | WP_001611932.1 | helix-turn-helix domain-containing protein | - |
| SGW57_RS07060 | - | 1363621..1363893 (+) | 273 | WP_001138305.1 | helix-turn-helix domain-containing protein | - |
| SGW57_RS07065 | - | 1363905..1364078 (+) | 174 | WP_000784892.1 | hypothetical protein | - |
| SGW57_RS07070 | - | 1364045..1364248 (+) | 204 | WP_001231376.1 | hypothetical protein | - |
| SGW57_RS07075 | - | 1364250..1364633 (+) | 384 | WP_000403837.1 | hypothetical protein | - |
| SGW57_RS07080 | - | 1364634..1364960 (+) | 327 | WP_001103967.1 | DUF1474 family protein | - |
| SGW57_RS07085 | - | 1365025..1365894 (+) | 870 | WP_001002709.1 | primase alpha helix C-terminal domain-containing protein | - |
| SGW57_RS07090 | - | 1365908..1367617 (+) | 1710 | WP_000447468.1 | DUF927 domain-containing protein | - |
| SGW57_RS07095 | - | 1367927..1368307 (+) | 381 | WP_000356942.1 | hypothetical protein | - |
| SGW57_RS07100 | - | 1368304..1368945 (+) | 642 | WP_338427451.1 | pathogenicity island protein | - |
| SGW57_RS07105 | - | 1369653..1369997 (+) | 345 | WP_001288442.1 | hypothetical protein | - |
| SGW57_RS07110 | - | 1370028..1370681 (+) | 654 | WP_000214170.1 | hypothetical protein | - |
| SGW57_RS07115 | - | 1370734..1371261 (+) | 528 | WP_000771361.1 | spore coat protein | - |
| SGW57_RS07120 | - | 1371393..1371605 (+) | 213 | WP_001656917.1 | hypothetical protein | - |
| SGW57_RS07125 | - | 1371602..1372171 (+) | 570 | WP_001293071.1 | terminase small subunit | - |
| SGW57_RS07130 | - | 1372218..1372301 (+) | 84 | Protein_1371 | terminase small subunit | - |
| SGW57_RS07135 | - | 1372448..1373416 (+) | 969 | WP_000801980.1 | Abi family protein | - |
| SGW57_RS07140 | - | 1373594..1373995 (+) | 402 | WP_000683457.1 | hypothetical protein | - |
| SGW57_RS07145 | - | 1374113..1374625 (+) | 513 | WP_000813311.1 | hypothetical protein | - |
| SGW57_RS07150 | - | 1374641..1374820 (+) | 180 | WP_000797954.1 | hypothetical protein | - |
| SGW57_RS07155 | - | 1375584..1376591 (-) | 1008 | WP_001080636.1 | Abi family protein | - |
| SGW57_RS07160 | - | 1376597..1377255 (-) | 659 | Protein_1377 | site-specific integrase | - |
| SGW57_RS07165 | - | 1377548..1377916 (+) | 369 | WP_000849155.1 | YxeA family protein | - |
| SGW57_RS07170 | - | 1378097..1378669 (+) | 573 | WP_000769723.1 | PepSY domain-containing protein | - |
| SGW57_RS07175 | - | 1378807..1379070 (-) | 264 | WP_001055897.1 | helix-turn-helix transcriptional regulator | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=906777 SGW57_RS07030 WP_000934799.1 1359448..1359951(+) (ssbA) [Staphylococcus aureus strain DA70484]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=906777 SGW57_RS07030 WP_000934799.1 1359448..1359951(+) (ssbA) [Staphylococcus aureus strain DA70484]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |