Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SIC15_RS19305 Genome accession   NZ_CP138917
Coordinates   4202346..4202738 (+) Length   130 a.a.
NCBI ID   WP_008175635.1    Uniprot ID   G6YWX8
Organism   Marinobacter sp. MIT932201     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4197346..4207738
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SIC15_RS19275 - 4197644..4198657 (-) 1014 WP_069182274.1 aspartate carbamoyltransferase catalytic subunit -
  SIC15_RS19280 pyrR 4198685..4199194 (-) 510 WP_136630896.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  SIC15_RS19285 ruvX 4199202..4199624 (-) 423 WP_412536719.1 Holliday junction resolvase RuvX -
  SIC15_RS19290 - 4199617..4200183 (-) 567 WP_069182277.1 YqgE/AlgH family protein -
  SIC15_RS19295 - 4200180..4201046 (-) 867 WP_069182278.1 energy transducer TonB -
  SIC15_RS19300 gshB 4201095..4202048 (-) 954 WP_412536720.1 glutathione synthase -
  SIC15_RS19305 pilG 4202346..4202738 (+) 393 WP_008175635.1 twitching motility response regulator PilG Regulator
  SIC15_RS19310 pilH 4202771..4203133 (+) 363 WP_008939836.1 twitching motility response regulator PilH -
  SIC15_RS19315 - 4203154..4203699 (+) 546 WP_069182279.1 chemotaxis protein CheW -
  SIC15_RS19320 - 4203791..4205866 (+) 2076 WP_412536721.1 methyl-accepting chemotaxis protein -
  SIC15_RS19325 - 4205894..4206793 (+) 900 WP_069182281.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14595.86 Da        Isoelectric Point: 5.2241

>NTDB_id=905892 SIC15_RS19305 WP_008175635.1 4202346..4202738(+) (pilG) [Marinobacter sp. MIT932201]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYVPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=905892 SIC15_RS19305 WP_008175635.1 4202346..4202738(+) (pilG) [Marinobacter sp. MIT932201]
ATGGATGACAACTTCGAGAATTTGAAGATCATGGTGATCGACGACAGTAAAACCATACGTCGCACCGCAGAAACCCTTCT
GAAAAAGGTCGGCTGTGAGGTCATCACCGCGACTGACGGCTTTGACGCTCTTGCAAAGATTGCCGATTCCCAGCCGGACA
TCATTTTTGTCGATATCATGATGCCCCGCCTGGACGGCTACCAGACCTGCGCACTTATCAAGAACAATTCCTCCTTCAAA
AAGACGCCGGTTATCATGCTCTCCAGCAAGGACGGGCTGTTCGACAAGGCCAAGGGCCGGATCGTCGGCTCGGACCAGTA
TCTGACCAAGCCGTTCAGTAAGGATGAGCTACTCAATACCATCCGCCAGTATGTTCCACAGGCGGAACAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G6YWX8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

96.154

0.754
  vicR Streptococcus mutans UA159

41.803

93.846

0.392
  micA Streptococcus pneumoniae Cp1015

44.037

83.846

0.369
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362