Detailed information NTG0090164

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: TthTMY_RS02920
• Genome accession: NZ_AP025158
• Coordinates: 507144..509417 (-)
• Length: 757 a.a.
• NCBI ID: WP_096412261.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain TMY
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 502144..514417

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TthTMY_RS02895 (TthTMY_05690)	-	502513..502887 (-)	375	WP_096412247.1	4'-phosphopantetheinyl transferase superfamily protein	-
TthTMY_RS02900 (TthTMY_05700)	rsmF	502940..504310 (+)	1371	WP_096412250.1	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	-
TthTMY_RS02905 (TthTMY_05710)	-	504336..505382 (-)	1047	WP_096412253.1	3-dehydroquinate synthase	-
TthTMY_RS02910 (TthTMY_05720)	-	505360..505914 (-)	555	WP_096412256.1	shikimate kinase	-
TthTMY_RS02915 (TthTMY_05730)	aroC	505934..507085 (-)	1152	WP_096412258.1	chorismate synthase	-
TthTMY_RS02920 (TthTMY_05740)	pilQ	507144..509417 (-)	2274	WP_096412261.1	secretin N-terminal domain-containing protein	Machinery gene
TthTMY_RS02925 (TthTMY_05750)	pilW	509414..510292 (-)	879	WP_096412264.1	competence protein	Machinery gene
TthTMY_RS02930 (TthTMY_05760)	pilO	510289..510870 (-)	582	WP_096412267.1	type 4a pilus biogenesis protein PilO	Machinery gene
TthTMY_RS02935 (TthTMY_05770)	pilN	510860..511483 (-)	624	WP_223903394.1	flagellar protein FliT	Machinery gene
TthTMY_RS02940 (TthTMY_05780)	pilM	511476..512609 (-)	1134	WP_096412270.1	type IV pilus assembly protein PilM	Machinery gene
TthTMY_RS02945 (TthTMY_05790)	-	512744..513748 (-)	1005	WP_096412273.1	homoisocitrate dehydrogenase	-
TthTMY_RS02950 (TthTMY_05800)	-	513803..514294 (-)	492	WP_096413136.1	DUF5317 domain-containing protein	-

Sequence

Protein

• Length: 757 a.a.
• Molecular weight: 82764.83 Da
• Isoelectric Point: 5.2296

>NTDB_id=90164 TthTMY_RS02920 WP_096412261.1 507144..509417(-) (pilQ) [Thermus thermophilus strain TMY]
MKSAWIRAAVIALAGLGAFGLAGSFPEEPRFQAPVNLKVSESQVKAGQTLPLDVVLEALARSVGLQPLIYRAYDTSGDPA
KAQPPLPNIKLDFQGKPFREVWDLLFATYGVQYGLDYLFLPPDVVVVAPTQVITALVDAPSRAGTTERRPYIVGIPEIAY
ERTETDAQGQTRTVVNIEGAKTWVQNDLLPFLSREAAGLNANWIVVEEGGRLKAVLSVLATPEQHARFADILQRAGIDFR
PLPALAQPKPRVERTYTLTYATFPDLLAFLQSRLPEAQISVVPTNPQRAIVLATEEDHARLSELLKAADVPKTVRKVYAL
QNLTFREAQERLKPLLEKELKGARLEGLPGNPKALLLEAPEAEHALFAEILKALDVPPQAPEAPQEATLRRLYPLRYANA
EQVAPFLAREVPGIVVQTVPGQPVLSVRGTEKQLAEVESLLAQIDRAPEQGPPVFQRAYQLSNAKAVELAQVLQEALKAR
QAQNQGQQNQALPTREATVVADPRTNTLIVTGTQEDLALVEGLIPRLDQAVPQVNLRVRIQEVQSNLTRNLGLKWNTVAG
GNVVASVLDSGLSLIFDSTRSLAALNILATLEALQRQGLSRALRDVNQTVLNNQTARLQSGETFLIRRVVGDRVERVPFD
IGIIVEVTPQITADGQILLNIKAEVSGNVQRNPVDGDVDRFTKQVVTTTLRVRDGETVVLGGLTSQENNQTQQGVPLLMD
IPLIGELFKQRTNETTDRELLVVITADILKETASANP

Nucleotide

• Length: 2274 bp

>NTDB_id=90164 TthTMY_RS02920 WP_096412261.1 507144..509417(-) (pilQ) [Thermus thermophilus strain TMY]
ATGAAGAGCGCGTGGATCCGTGCGGCCGTGATCGCCCTCGCAGGGCTAGGGGCCTTTGGCCTTGCGGGGAGCTTTCCCGA
GGAGCCCCGCTTCCAGGCCCCGGTGAACCTCAAGGTCTCGGAATCCCAGGTCAAGGCGGGCCAGACCCTGCCCTTGGACG
TGGTCCTCGAGGCCCTGGCGAGGAGCGTGGGCCTCCAGCCCCTCATCTACCGGGCCTACGATACAAGCGGAGACCCCGCC
AAGGCTCAGCCCCCCCTGCCCAACATCAAGCTGGACTTCCAGGGCAAGCCCTTCCGGGAGGTGTGGGACCTCCTCTTCGC
CACCTACGGGGTCCAGTACGGCCTGGACTACCTCTTCCTGCCCCCCGACGTGGTGGTGGTGGCCCCCACCCAGGTGATCA
CCGCCCTGGTGGACGCCCCAAGCCGCGCGGGGACCACGGAGCGCAGGCCCTACATCGTGGGCATCCCCGAGATCGCCTAC
GAGCGCACGGAGACGGACGCCCAGGGCCAGACCCGCACCGTGGTCAACATTGAGGGCGCCAAGACCTGGGTGCAAAACGA
CCTCCTCCCCTTCCTCTCCCGGGAGGCCGCAGGGCTCAACGCGAACTGGATCGTGGTGGAGGAGGGCGGGAGGCTCAAGG
CCGTCCTCTCCGTCCTCGCCACCCCCGAGCAGCACGCCCGCTTCGCCGACATCCTGCAACGGGCGGGGATTGACTTCCGC
CCCCTCCCCGCCCTGGCCCAGCCCAAGCCCCGGGTGGAGAGGACCTACACCCTCACCTACGCCACCTTCCCCGACCTCCT
CGCCTTCCTTCAGTCCCGCCTCCCCGAGGCCCAGATCAGCGTGGTGCCCACCAACCCCCAAAGGGCCATCGTCCTCGCCA
CCGAGGAGGACCACGCCCGCTTGAGCGAGCTCCTGAAGGCCGCCGACGTCCCCAAGACCGTCCGGAAGGTCTACGCCTTG
CAGAACCTCACCTTCAGGGAGGCCCAGGAACGCCTAAAGCCCCTCCTGGAAAAGGAGCTCAAGGGGGCCCGCCTGGAGGG
TCTCCCCGGCAACCCCAAGGCCCTCCTCCTCGAGGCCCCCGAGGCGGAGCACGCCCTCTTCGCCGAGATCCTGAAGGCCC
TGGACGTCCCCCCCCAGGCCCCCGAAGCCCCCCAGGAGGCCACCTTAAGGCGCCTCTACCCCCTGCGCTACGCCAACGCC
GAGCAGGTGGCCCCCTTCCTCGCCCGGGAGGTGCCGGGGATCGTGGTCCAGACCGTCCCCGGCCAACCCGTTCTCTCGGT
GCGGGGCACGGAGAAGCAGCTTGCCGAGGTGGAAAGCCTCCTCGCCCAGATTGACCGGGCCCCCGAGCAGGGCCCCCCCG
TCTTCCAGCGGGCCTACCAGCTCTCCAACGCCAAGGCGGTGGAGCTCGCCCAGGTGCTCCAGGAGGCGCTCAAGGCCCGG
CAGGCCCAGAACCAGGGCCAGCAGAACCAGGCCCTCCCCACCCGGGAGGCCACGGTGGTGGCCGACCCCAGGACCAACAC
CCTCATCGTCACCGGCACCCAGGAGGACCTCGCCCTGGTGGAGGGCCTCATCCCCAGGCTGGACCAGGCGGTGCCCCAGG
TGAACCTCCGGGTGCGCATCCAAGAGGTGCAGTCCAACCTCACCCGCAACCTCGGCCTCAAGTGGAACACCGTGGCCGGG
GGGAACGTGGTGGCGAGCGTTTTGGACTCGGGGCTTTCCCTCATCTTTGACTCCACCCGTAGCCTCGCCGCCCTCAACAT
CCTGGCCACCCTCGAGGCCCTCCAGCGCCAGGGCCTTTCCCGGGCCCTCCGGGATGTGAACCAGACGGTGCTCAACAACC
AGACCGCCCGGCTCCAGTCCGGCGAAACCTTCCTCATCCGCCGGGTGGTGGGGGACCGGGTGGAGCGGGTGCCCTTTGAC
ATCGGCATCATCGTGGAGGTCACCCCGCAGATCACCGCCGACGGCCAGATCCTCCTCAACATCAAGGCCGAGGTCTCGGG
GAACGTCCAACGCAACCCCGTGGACGGGGACGTGGACCGCTTCACCAAGCAGGTGGTGACCACCACCCTCCGGGTGAGGG
ACGGGGAGACCGTGGTCCTCGGGGGCCTCACCTCCCAGGAGAACAACCAGACCCAGCAGGGGGTGCCCCTCCTCATGGAC
ATCCCCCTCATCGGGGAGCTCTTCAAGCAACGGACCAACGAGACCACGGACCGGGAGCTTCTGGTGGTCATCACCGCCGA
CATCCTCAAGGAGACGGCCTCGGCGAACCCCTAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (593-750)

• Bacterial type II/III secretion system short domain (Secretin_N) (391-450)

• Bacterial type II/III secretion system short domain (Secretin_N) (457-533)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Thermus thermophilus HB27	93.263	100	0.933