Detailed information NTG0901355

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: RA179_RS13090
• Genome accession: NZ_CP138201
• Coordinates: 2563393..2565723 (-)
• Length: 776 a.a.
• NCBI ID: WP_286109244.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain DY299
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2558393..2570723

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RA179_RS13055 (RA179_13055)	-	2558733..2559071 (-)	339	WP_101864551.1	YqxA family protein	-
RA179_RS13060 (RA179_13060)	spoIIP	2559088..2560293 (-)	1206	WP_044154491.1	spore autolysin SpoIIP	-
RA179_RS13065 (RA179_13065)	gpr	2560356..2561462 (-)	1107	WP_044154490.1	GPR endopeptidase	-
RA179_RS13070 (RA179_13070)	rpsT	2561666..2561932 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
RA179_RS13075 (RA179_13075)	holA	2561947..2562990 (-)	1044	WP_151175155.1	DNA polymerase III subunit delta	-
RA179_RS13080 (RA179_13080)	-	2563030..2563179 (-)	150	WP_151175156.1	hypothetical protein	-
RA179_RS13085 (RA179_13085)	-	2563220..2563354 (+)	135	WP_010335005.1	YqzM family protein	-
RA179_RS13090 (RA179_13090)	comEC	2563393..2565723 (-)	2331	WP_286109244.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
RA179_RS13095 (RA179_13095)	-	2565727..2566296 (-)	570	WP_010335007.1	ComE operon protein 2	-
RA179_RS13100 (RA179_13100)	comEA	2566363..2566980 (-)	618	WP_151175157.1	helix-hairpin-helix domain-containing protein	Machinery gene
RA179_RS13105 (RA179_13105)	comER	2567064..2567885 (+)	822	WP_101864554.1	late competence protein ComER	-
RA179_RS13110 (RA179_13110)	-	2567950..2568693 (-)	744	WP_106020124.1	class I SAM-dependent methyltransferase	-
RA179_RS13115 (RA179_13115)	rsfS	2568690..2569046 (-)	357	WP_044154484.1	ribosome silencing factor	-
RA179_RS13120 (RA179_13120)	yqeK	2569064..2569624 (-)	561	WP_106020125.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
RA179_RS13125 (RA179_13125)	-	2569614..2570183 (-)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
RA179_RS13130 (RA179_13130)	yhbY	2570194..2570484 (-)	291	WP_106020126.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86170.32 Da
• Isoelectric Point: 8.2228

>NTDB_id=901355 RA179_RS13090 WP_286109244.1 2563393..2565723(-) (comEC) [Bacillus halotolerans strain DY299]
MRNSRLLLPLAAASATAGIAAASYFSAVFLFFLSLLIVSTKTRHAPLIFVCLFSFVLNFALFKITDSQNTSSYQQGSYHF
KAVIHSIPKIDGDRMSMLIKTPDGEKWAASYRIQSLAEKDKLSHLEPGMACELTGTLEKPKQATVPGTFDYQQYLYRQRI
HWSYSVTSIGNCSEPSGVRYKLLSLRKYIVSFTNTQLPPDSAGIVQALTVGERSYLDDDVLNAYQSLGVVHLLAISGLHI
GILTAGLFYAMIRLGITRENASILLLLFLPIYVILTGAAPSVLRAALMSGIYLAGSLFQQRVNSAGVICLSYIVLLLFNP
YYLFEAGFQLSFAVSFSLILSSSIFQHIKTSLGQLTIVSVIAQLGSLPILLYHFQQFSIISIPMNMVLVPFYTFCILPAA
IIGVILLFFSTSVGQFLFYWFDVMMTWINRLITKIADIEIFTIIISRPAPALLLLFTLTVIILLMSIEKPSFPRLTVSTG
LFCATLILLFVSPYVSSEGEVDMIDIGQGDSMFVSAPYQKGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAEVLLKHHKVKRLIIPKGFVSESHDEKVLRTARQEGVAIEEVKRGDVLQIKDLQFHVLSPE
TPDPASKNNSSLVLWMKTGRISWLLTGDLEKEGEQEVIDVFPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAVISAGEN
NRYHHPHQEVLQLLKSRSIRVLRTDQSGTIQYTYKSGSGTFSVYPPYDTSDMTETN

Nucleotide

• Length: 2331 bp

>NTDB_id=901355 RA179_RS13090 WP_286109244.1 2563393..2565723(-) (comEC) [Bacillus halotolerans strain DY299]
ATGCGGAATTCGCGTCTATTATTGCCTTTGGCGGCAGCTTCAGCAACGGCTGGAATTGCTGCCGCCTCTTATTTCTCCGC
TGTCTTTCTCTTCTTCCTCTCTCTTCTTATTGTGTCAACCAAAACAAGGCACGCTCCACTCATTTTTGTTTGTTTATTCT
CTTTTGTACTCAATTTTGCCCTGTTTAAGATCACAGATTCTCAAAATACTTCTTCGTATCAGCAGGGCAGCTATCACTTC
AAGGCGGTTATTCATAGTATTCCTAAAATTGACGGGGATCGGATGTCTATGCTGATCAAGACGCCCGATGGCGAAAAATG
GGCTGCCTCTTATCGGATTCAGTCTTTAGCTGAAAAAGACAAACTGTCACATCTAGAGCCGGGTATGGCATGCGAATTGA
CTGGTACTTTGGAGAAGCCAAAACAAGCAACAGTGCCGGGAACATTTGATTATCAACAGTATCTTTACCGGCAGCGTATT
CATTGGAGCTATTCTGTCACATCTATTGGAAATTGCAGCGAGCCTTCAGGTGTCCGGTATAAGCTTCTCAGTTTGAGAAA
ATACATCGTATCATTCACGAACACACAGCTTCCGCCAGATTCAGCAGGAATCGTACAGGCGCTTACAGTAGGTGAAAGAT
CTTATTTAGATGACGATGTGCTTAATGCTTACCAAAGTCTAGGTGTTGTCCATCTGTTAGCCATCTCAGGACTCCATATC
GGGATTTTGACAGCAGGCCTATTTTATGCAATGATCCGTCTGGGCATAACAAGAGAAAATGCGTCAATCCTATTGCTTTT
GTTTCTGCCGATCTATGTTATTTTGACAGGTGCAGCGCCTTCTGTTCTCCGAGCCGCTCTGATGTCCGGCATCTACTTAG
CGGGAAGCCTTTTTCAGCAGCGGGTGAATTCTGCCGGGGTAATCTGTCTTTCGTATATTGTCCTCTTGCTTTTTAATCCC
TACTACCTTTTTGAAGCTGGATTTCAGCTTTCATTTGCGGTCAGTTTTTCTTTAATTCTCTCATCGTCTATTTTTCAGCA
TATCAAAACGAGTCTGGGACAGCTGACGATTGTATCTGTTATTGCCCAGCTAGGCTCACTACCCATTCTTCTGTATCATT
TTCAGCAGTTTTCTATCATTAGCATTCCAATGAATATGGTGTTGGTGCCTTTTTATACATTCTGTATTTTACCGGCTGCT
ATTATAGGAGTTATTCTATTATTTTTTTCAACGTCCGTCGGTCAATTTCTGTTCTATTGGTTTGATGTAATGATGACCTG
GATCAACAGACTGATCACTAAAATCGCTGATATAGAAATATTCACAATCATCATCTCTCGCCCTGCACCTGCTCTTCTTC
TCTTATTCACGCTCACTGTCATCATATTGCTTATGAGTATTGAGAAACCCTCATTTCCCCGGCTGACAGTGTCCACAGGC
CTTTTTTGTGCAACGCTTATCCTGCTCTTTGTTTCCCCTTATGTTAGTTCCGAGGGAGAAGTAGATATGATTGATATCGG
ACAAGGTGACAGTATGTTTGTCAGTGCACCGTATCAGAAAGGCCGTGTTTTAATTGATACGGGAGGCACTTTGTCTTATT
CGTCAGAGCCTTGGCGGGAAAAACAGCATCCTTTTTCACTGGGGGAAAAGGTGCTGATCCCTTTTTTAACGGCAAAGGGC
ATCAAGCAACTTGATGCGCTGATACTGACGCACGCAGATCAAGATCATATCGGAGAGGCAGAGGTTTTGCTGAAGCATCA
TAAAGTGAAGCGTCTCATCATTCCGAAAGGGTTTGTTTCTGAATCTCATGATGAGAAAGTGCTGCGGACTGCCAGACAGG
AGGGTGTGGCAATTGAAGAGGTGAAGCGGGGTGATGTATTGCAAATAAAGGACTTACAGTTTCATGTGCTGTCACCGGAA
ACGCCTGATCCGGCAAGTAAAAATAATTCTTCTCTCGTTCTATGGATGAAAACAGGCAGGATCAGCTGGCTCCTGACGGG
TGATCTGGAAAAAGAGGGGGAACAGGAGGTTATCGATGTGTTCCCAAATATAAAAGCGGATGTGTTAAAGGTGGGGCATC
ATGGAAGCAAGGGCTCGACCGGTGAAGAATTCATCAAACAGCTTCAGCCCAAAACGGCGGTCATCTCAGCGGGTGAAAAC
AATAGGTACCATCATCCGCATCAAGAAGTTCTTCAATTGTTAAAGAGCCGATCCATTCGTGTGCTGCGCACTGATCAAAG
CGGCACGATCCAATACACGTACAAAAGCGGATCTGGAACCTTTTCTGTTTATCCTCCATATGATACATCAGATATGACAG
AGACGAATTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Domain of unknown function (DUF4131) (DUF4131) (25-169)

• Competence protein (Competence) (208-469)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	79.381	100	0.794