Detailed information NTG0901135

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: SBK94_RS17425
• Genome accession: NZ_CP137889
• Coordinates: 3492029..3493192 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain N23
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3487029..3498192

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SBK94_RS17395 (SBK94_17395)	-	3487294..3487713 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
SBK94_RS17400 (SBK94_17400)	comFC	3487787..3488476 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
SBK94_RS17405 (SBK94_17405)	-	3488482..3488766 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
SBK94_RS17410 (SBK94_17410)	comFA	3488824..3490209 (-)	1386	WP_014305928.1	DEAD/DEAH box helicase	Machinery gene
SBK94_RS17415 (SBK94_17415)	-	3490317..3491165 (-)	849	WP_014305929.1	DegV family protein	-
SBK94_RS17420 (SBK94_17420)	degU	3491263..3491952 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
SBK94_RS17425 (SBK94_17425)	degS	3492029..3493192 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
SBK94_RS17430 (SBK94_17430)	-	3493415..3494062 (+)	648	WP_003151384.1	YigZ family protein	-
SBK94_RS17435 (SBK94_17435)	-	3494067..3495281 (+)	1215	WP_014305930.1	LCP family protein	-
SBK94_RS17440 (SBK94_17440)	-	3495371..3496447 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
SBK94_RS17445 (SBK94_17445)	tuaH	3496580..3497776 (-)	1197	WP_014305931.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=901135 SBK94_RS17425 WP_003151385.1 3492029..3493192(-) (degS) [Bacillus velezensis strain N23]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=901135 SBK94_RS17425 WP_003151385.1 3492029..3493192(-) (degS) [Bacillus velezensis strain N23]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948