Detailed information NTG0900367

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABHL50_RS04400
• Genome accession: NZ_CP156933
• Coordinates: 909268..910386 (-)
• Length: 372 a.a.
• NCBI ID: WP_024432390.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 2024CK-00546
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 904268..915386

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABHL50_RS04370 (ABHL50_04370)	-	905101..905949 (+)	849	WP_000336554.1	class II glutamine amidotransferase	-
ABHL50_RS04375 (ABHL50_04375)	-	906198..906653 (+)	456	WP_000782976.1	bacteriohemerythrin	-
ABHL50_RS04380 (ABHL50_04380)	-	906806..907873 (+)	1068	WP_029776981.1	membrane protein	-
ABHL50_RS04385 (ABHL50_04385)	-	907873..908196 (+)	324	WP_000442585.1	RnfH family protein	-
ABHL50_RS04390 (ABHL50_04390)	bamE	908251..908649 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
ABHL50_RS04395 (ABHL50_04395)	fur	908761..909198 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
ABHL50_RS04400 (ABHL50_04400)	pilU	909268..910386 (-)	1119	WP_024432390.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABHL50_RS04405 (ABHL50_04405)	pilT	910414..911451 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
ABHL50_RS04410 (ABHL50_04410)	-	911578..912270 (+)	693	WP_024432389.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41889.11 Da
• Isoelectric Point: 6.6945

>NTDB_id=900367 ABHL50_RS04400 WP_024432390.1 909268..910386(-) (pilU) [Acinetobacter baumannii strain 2024CK-00546]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDFAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=900367 ABHL50_RS04400 WP_024432390.1 909268..910386(-) (pilU) [Acinetobacter baumannii strain 2024CK-00546]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCAGGCGAAGTAATTGGTCAACTATTACATTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
TCGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAGGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCTGATGAGGGTCCTGATCAATTATCAGACGGAAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.661	100	0.769
pilU	Pseudomonas stutzeri DSM 10701	69.293	98.925	0.685
pilU	Vibrio cholerae strain A1552	52.973	99.462	0.527
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.197	93.011	0.392