Detailed information NTG0899258

Bioinformatically predicted

Overview

• Name: comYH
• Type: Machinery gene
• Locus tag: R5H38_RS09305
• Genome accession: NZ_CP137602
• Coordinates: 1816399..1817352 (-)
• Length: 317 a.a.
• NCBI ID: WP_318150618.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain 221006
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1811399..1822352

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R5H38_RS09280	-	1811442..1811726 (-)	285	WP_318150615.1	DUF4651 domain-containing protein	-
R5H38_RS09285	pepA	1811939..1813000 (+)	1062	WP_318150616.1	glutamyl aminopeptidase	-
R5H38_RS09290	-	1813045..1814301 (-)	1257	WP_318151034.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
R5H38_RS09295	-	1814356..1814907 (-)	552	WP_217374325.1	folate family ECF transporter S component	-
R5H38_RS09300	-	1815162..1816349 (-)	1188	WP_318150617.1	acetate kinase	-
R5H38_RS09305	comYH	1816399..1817352 (-)	954	WP_318150618.1	class I SAM-dependent methyltransferase	Machinery gene
R5H38_RS09310	comGG	1817372..1817872 (-)	501	WP_318150619.1	competence type IV pilus minor pilin ComGG	-
R5H38_RS09315	comYF	1817850..1818308 (-)	459	WP_412080657.1	competence type IV pilus minor pilin ComGF	Machinery gene
R5H38_RS09320	comGE	1818271..1818564 (-)	294	WP_318150621.1	competence type IV pilus minor pilin ComGE	-
R5H38_RS09325	comGD	1818536..1818940 (-)	405	WP_318150622.1	competence type IV pilus minor pilin ComGD	-
R5H38_RS09330	comYC	1818924..1819208 (-)	285	WP_277837557.1	competence type IV pilus major pilin ComGC	Machinery gene
R5H38_RS09335	comYB	1819210..1820247 (-)	1038	WP_318151035.1	competence type IV pilus assembly protein ComGB	Machinery gene
R5H38_RS09340	comYA	1820159..1821109 (-)	951	WP_318150623.1	competence type IV pilus ATPase ComGA	Machinery gene
R5H38_RS09345	-	1821225..1822148 (+)	924	WP_318151036.1	LD-carboxypeptidase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35606.83 Da
• Isoelectric Point: 4.6418

>NTDB_id=899258 R5H38_RS09305 WP_318150618.1 1816399..1817352(-) (comYH) [Streptococcus parasuis strain 221006]
MKYEKIEQAYNLLLENVQTIQNQLGTNIYDAIIEQNAAYVAGQHETELVLNNNQILRELALTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVSTPRVTVLEIGSGTGNLAQTILNASQKELDYLGIEIDDLLIDLSASIADVMGAA
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEKANIVAMIALPPNLFGKAAMAKSIFVLQKKAARPLTPFVYPLQSLQEPEAIQKFMVNFKNWKQENAI

Nucleotide

• Length: 954 bp

>NTDB_id=899258 R5H38_RS09305 WP_318150618.1 1816399..1817352(-) (comYH) [Streptococcus parasuis strain 221006]
ATGAAATATGAAAAAATTGAACAGGCCTACAACCTGCTTTTAGAAAATGTACAGACGATACAAAATCAACTTGGGACCAA
TATTTATGATGCTATAATTGAGCAAAATGCTGCCTATGTAGCTGGTCAACATGAAACCGAACTTGTTCTCAACAATAATC
AAATCTTGAGAGAATTAGCCTTGACAAAGGAAGAATGGCGTCGTGCTTACCAATTCTTACTCATTAAAGCTAACCAGACA
GAACCGATGCAGTACAACCATCAGTTCACACCTGACTCTATCGGATTTATTTTATCTTTCCTTGTTGACCAGTTGGTCTC
TACTCCAAGAGTAACGGTTTTGGAAATTGGTTCTGGTACAGGAAACTTAGCTCAGACAATTCTCAACGCCAGCCAGAAGG
AATTAGATTATTTAGGGATTGAAATAGATGACCTCTTGATTGATTTATCGGCTAGTATCGCGGATGTCATGGGAGCAGCT
ATTTCATTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAAGAAAGCCAAGTGATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTAGCCAGTCCAAATGAACATACATACGCCCATCATTTGCTCA
TGGAACAGTCCCTCAAATATCTGGAAAAAGATGGATTTGCGATTTTACTGGCTCCAAATGATTTATTAACGAGTCCGCAA
AGCGATTTATTAAAAGGCTGGTTACAAGAAAAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTTTTTGGGAA
GGCTGCCATGGCCAAGTCCATTTTTGTGTTACAAAAGAAAGCTGCCAGACCTTTAACTCCTTTCGTTTATCCTTTGCAAA
GCCTGCAAGAACCAGAAGCGATTCAGAAGTTCATGGTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTGA

Domains

Predicted by InterproScan.

• N-6 DNA Methylase (N6_Mtase) (68-283)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYH	Streptococcus mutans UA140	59.494	99.685	0.593
comYH	Streptococcus mutans UA159	58.991	100	0.59