Detailed information NTG0898885

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: ABEG41_RS14020
• Genome accession: NZ_CP155795
• Coordinates: 2680785..2682050 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain D137
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2675785..2687050

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEG41_RS14000 (ABEG41_14000)	yrrB	2677156..2677776 (-)	621	WP_202926392.1	tetratricopeptide repeat protein	-
ABEG41_RS14005 (ABEG41_14005)	mnmA	2677862..2678977 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
ABEG41_RS14010 (ABEG41_14010)	iscSA	2679008..2680147 (-)	1140	WP_033882962.1	cysteine desulfurase family protein	-
ABEG41_RS14015 (ABEG41_14015)	cymR	2680166..2680582 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
ABEG41_RS14020 (ABEG41_14020)	rarA	2680785..2682050 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
ABEG41_RS14025 (ABEG41_14025)	tcdA	2682092..2682856 (-)	765	WP_032722252.1	tRNA threonylcarbamoyladenosine dehydratase	-
ABEG41_RS14035 (ABEG41_14035)	aspS	2683192..2684970 (-)	1779	WP_032722253.1	aspartate--tRNA ligase	-
ABEG41_RS14040 (ABEG41_14040)	hisS	2684984..2686258 (-)	1275	WP_032722254.1	histidine--tRNA ligase	-
ABEG41_RS14045 (ABEG41_14045)	yrzK	2686640..2686810 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=898885 ABEG41_RS14020 WP_004398500.1 2680785..2682050(+) (rarA) [Bacillus subtilis strain D137]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=898885 ABEG41_RS14020 WP_004398500.1 2680785..2682050(+) (rarA) [Bacillus subtilis strain D137]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1