Detailed information NTG0896549

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ABC803_RS01580
• Genome accession: NZ_CP155531
• Coordinates: 285412..286311 (+)
• Length: 299 a.a.
• NCBI ID: WP_000904848.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain SN36255
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 280412..291311

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC803_RS01550 (ABC803_01550)	-	280584..280876 (+)	293	Protein_276	hypothetical protein	-
ABC803_RS01555 (ABC803_01555)	-	281032..282246 (+)	1215	WP_000666484.1	pyridoxal phosphate-dependent aminotransferase	-
ABC803_RS01560 (ABC803_01560)	rpmH	282391..282525 (+)	135	WP_000831905.1	50S ribosomal protein L34	-
ABC803_RS01565 (ABC803_01565)	-	282809..283702 (+)	894	WP_001816585.1	cell wall surface anchor protein	-
ABC803_RS01570 (ABC803_01570)	-	284007..284780 (+)	774	WP_000575650.1	TatD family hydrolase	-
ABC803_RS01575 (ABC803_01575)	rnmV	284780..285340 (+)	561	WP_000660013.1	ribonuclease M5	-
ABC803_RS01580 (ABC803_01580)	comR	285412..286311 (+)	900	WP_000904848.1	helix-turn-helix transcriptional regulator	Regulator
ABC803_RS01585 (ABC803_01585)	-	286579..288609 (+)	2031	WP_000825271.1	bacteriocin-associated integral membrane family protein	-
ABC803_RS01590 (ABC803_01590)	-	288611..289252 (+)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
ABC803_RS01595 (ABC803_01595)	-	289245..289538 (+)	294	Protein_285	hypothetical protein	-
ABC803_RS01600 (ABC803_01600)	rsmA	289789..290661 (+)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35420.14 Da
• Isoelectric Point: 4.6674

>NTDB_id=896549 ABC803_RS01580 WP_000904848.1 285412..286311(+) (comR) [Streptococcus pneumoniae strain SN36255]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEELMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=896549 ABC803_RS01580 WP_000904848.1 285412..286311(+) (comR) [Streptococcus pneumoniae strain SN36255]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATATCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAGAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus pyogenes MGAS8232	36.577	99.666	0.365
comR	Streptococcus pyogenes MGAS315	36	100	0.361
comR	Streptococcus suis P1/7	37.113	97.324	0.361
comR	Streptococcus suis 05ZYH33	37.113	97.324	0.361