Detailed information NTG0089549

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LDO07_RS01490
• Genome accession: NZ_AP024937
• Coordinates: 260854..261858 (-)
• Length: 334 a.a.
• NCBI ID: WP_143584529.1
• Uniprot ID: A0AAD1NWB8
• Organism: Thermus thermophilus strain AK1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 255854..266858

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LDO07_RS01465 (TthAK1_02810)	hisG	256748..257368 (+)	621	WP_060384772.1	ATP phosphoribosyltransferase	-
LDO07_RS01470 (TthAK1_02820)	trmH	257365..257949 (+)	585	WP_223965894.1	tRNA (guanosine(18)-2'-O)-methyltransferase TrmH	-
LDO07_RS01475 (TthAK1_02830)	-	257939..258892 (-)	954	WP_223965895.1	branched-chain amino acid transaminase	-
LDO07_RS01480 (TthAK1_02840)	-	258879..259832 (-)	954	WP_143584522.1	hydrogen peroxide-inducible genes activator	-
LDO07_RS01485 (TthAK1_02850)	-	259942..260850 (+)	909	WP_143584525.1	manganese catalase family protein	-
LDO07_RS01490 (TthAK1_02860)	dprA	260854..261858 (-)	1005	WP_143584529.1	DNA-processing protein DprA	Machinery gene
LDO07_RS01495 (TthAK1_02870)	era	261943..262848 (+)	906	WP_008630929.1	GTPase Era	-
LDO07_RS01500 (TthAK1_02880)	-	262893..263780 (+)	888	WP_143584533.1	acyltransferase	-
LDO07_RS01510 (TthAK1_02890)	-	263976..264950 (+)	975	WP_143584535.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	-
LDO07_RS01515 (TthAK1_02900)	-	264928..265476 (-)	549	WP_223965896.1	Uma2 family endonuclease	-
LDO07_RS01520 (TthAK1_02910)	-	265486..266706 (-)	1221	WP_143584541.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 35982.73 Da
• Isoelectric Point: 6.1789

>NTDB_id=89549 LDO07_RS01490 WP_143584529.1 260854..261858(-) (dprA) [Thermus thermophilus strain AK1]
MDPLALALLPGIGPKRLLEVLKAEDPLGFLRERFPEAWRHLPEAEAQAERERGRAEALGVRILGLWEEGFPEGLKALPQP
PTHLYLKGELPPEREAVALVGTRRASPWALAFARRLARELSEAGLWVVSGLARGIDREAHLGALEAGGRTLGVLGSALDR
VYPPENRPLAQRMDLLSEFPFGTGPKPEFFPRRNRLIAGLSRAVVVVEAPLDSGALITARHALELGKEVLAVPGRPTDER
SLGANRLIQDGAYPVLSAEDVLAYLGVAARPKPLPGLSPEEEALYALLQEKGEALPEALAMALGIPPERVLSLLTLLELK
GLARALPGGRYGPG

Nucleotide

• Length: 1005 bp

>NTDB_id=89549 LDO07_RS01490 WP_143584529.1 260854..261858(-) (dprA) [Thermus thermophilus strain AK1]
GTGGACCCCTTGGCCCTCGCCCTCCTCCCGGGCATCGGCCCCAAGCGGCTTTTGGAGGTCCTAAAGGCGGAGGACCCTCT
GGGCTTCCTGCGGGAGCGCTTCCCCGAGGCCTGGCGGCACCTCCCCGAGGCCGAGGCCCAGGCGGAAAGGGAAAGGGGGC
GCGCCGAGGCCCTGGGGGTGCGCATCCTGGGCCTCTGGGAGGAGGGCTTCCCCGAGGGTCTGAAGGCGCTTCCCCAGCCG
CCCACCCACCTCTACCTGAAGGGGGAGCTTCCCCCGGAAAGGGAGGCGGTGGCCCTCGTGGGCACGCGCCGGGCCTCTCC
TTGGGCCTTGGCCTTTGCCCGGAGGCTCGCCCGGGAGCTTTCCGAGGCCGGGCTTTGGGTGGTCTCGGGCCTCGCCCGGG
GCATAGACCGGGAGGCCCACCTCGGGGCCCTCGAGGCCGGGGGGCGCACCCTGGGCGTCCTGGGAAGCGCCCTGGACCGG
GTCTACCCCCCGGAAAACCGCCCTTTGGCCCAACGGATGGACCTCCTCTCCGAGTTCCCCTTCGGGACCGGCCCTAAGCC
CGAGTTCTTTCCCCGGCGGAACCGCCTCATCGCCGGGCTCTCCCGGGCGGTGGTCGTGGTGGAGGCCCCCCTGGACTCCG
GGGCCCTCATCACCGCCCGCCACGCCTTGGAGCTCGGCAAGGAGGTGCTGGCCGTCCCCGGAAGGCCCACGGACGAGCGT
TCCCTGGGGGCCAACCGCCTCATCCAGGACGGGGCCTACCCGGTGCTCTCCGCCGAGGACGTCCTTGCCTACCTGGGGGT
GGCCGCAAGGCCCAAACCCCTCCCGGGCCTCTCCCCGGAGGAGGAGGCCCTTTACGCCCTCCTGCAGGAAAAGGGGGAGG
CGCTCCCCGAGGCCCTGGCCATGGCCCTGGGGATCCCCCCGGAGCGGGTGCTCTCCCTCCTCACCCTCTTGGAGCTAAAG
GGCCTGGCCCGGGCCCTCCCGGGAGGGCGCTACGGGCCAGGCTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (56-255)

• DprA winged helix domain (DprA_WH) (268-329)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Thermus thermophilus HB27	97.305	100	0.973
dprA	Vibrio campbellii strain DS40M4	38.547	100	0.413
dprA	Vibrio cholerae strain A1552	37.569	100	0.407
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	45.548	87.425	0.398
dprA	Neisseria meningitidis strain C311	37.425	100	0.374
dprA	Neisseria meningitidis MC58	37.425	100	0.374