Detailed information NTG0895019

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: R4714_RS04285
• Genome accession: NZ_CP137099
• Coordinates: 796620..797081 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250539.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 20824-4
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 791620..802081

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4714_RS04250	-	791926..792750 (-)	825	WP_000727904.1	membrane protein insertase YidC	-
R4714_RS04255	rnpA	792725..793096 (-)	372	WP_000739246.1	ribonuclease P protein component	-
R4714_RS04260	-	793113..793244 (-)	132	WP_000768904.1	hypothetical protein	-
R4714_RS04265	-	793245..794435 (-)	1191	WP_000167766.1	acetate kinase	-
R4714_RS04270	comYH	794486..795439 (-)	954	WP_000345130.1	class I SAM-dependent methyltransferase	Machinery gene
R4714_RS04275	-	795500..796094 (-)	595	Protein_810	class I SAM-dependent methyltransferase	-
R4714_RS04280	comGG/cglG	796250..796642 (-)	393	WP_219576921.1	competence type IV pilus minor pilin ComGG	Machinery gene
R4714_RS04285	comGF/cglF	796620..797081 (-)	462	WP_000250539.1	competence type IV pilus minor pilin ComGF	Machinery gene
R4714_RS04290	comGE/cglE	797044..797346 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
R4714_RS04295	comGD/cglD	797309..797713 (-)	405	WP_000588030.1	competence type IV pilus minor pilin ComGD	Machinery gene
R4714_RS04300	comGC/cglC	797706..797972 (-)	267	WP_000962022.1	competence type IV pilus major pilin ComGC	Machinery gene
R4714_RS04305	-	797974..798231 (-)	258	WP_000698512.1	hypothetical protein	-
R4714_RS04310	-	798502..799458 (-)	957	WP_057524567.1	N-acetylmuramoyl-L-alanine amidase family protein	-
R4714_RS04315	-	799462..799794 (-)	333	WP_317769868.1	phage holin	-
R4714_RS04320	-	799798..800097 (-)	300	WP_001811580.1	hypothetical protein	-
R4714_RS04325	-	800106..800456 (-)	351	WP_000852245.1	hypothetical protein	-
R4714_RS04330	-	800459..800662 (-)	204	WP_001091112.1	hypothetical protein	-
R4714_RS04335	-	800643..800759 (-)	117	WP_001063633.1	hypothetical protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17851.34 Da
• Isoelectric Point: 6.4832

>NTDB_id=895019 R4714_RS04285 WP_000250539.1 796620..797081(-) (comGF/cglF) [Streptococcus pneumoniae strain 20824-4]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQTMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTDASGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEES

Nucleotide

• Length: 462 bp

>NTDB_id=895019 R4714_RS04285 WP_000250539.1 796620..797081(-) (comGF/cglF) [Streptococcus pneumoniae strain 20824-4]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAACTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGACCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACCGATGCTAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAGAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae D39	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae R6	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae TIGR4	94.118	100	0.941
comGF/cglF	Streptococcus mitis SK321	92.81	100	0.928
comGF/cglF	Streptococcus mitis NCTC 12261	91.503	100	0.915