Detailed information NTG0894707

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: R3L06_RS11200
• Genome accession: NZ_CP137069
• Coordinates: 2330855..2331913 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain SNUBHAB0062
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2325855..2336913

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L06_RS11185 (R3L06_11190)	-	2326960..2327292 (+)	333	WP_000169594.1	hypothetical protein	-
R3L06_RS11190 (R3L06_11195)	-	2327295..2328119 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
R3L06_RS11195 (R3L06_11200)	ponA	2328137..2330692 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
R3L06_RS11200 (R3L06_11205)	pilM	2330855..2331913 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
R3L06_RS11205 (R3L06_11210)	pilN	2331913..2332554 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
R3L06_RS11210 (R3L06_11215)	pilO	2332551..2333291 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
R3L06_RS11215 (R3L06_11220)	pilP	2333302..2333829 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
R3L06_RS11220 (R3L06_11225)	pilQ	2333897..2336059 (+)	2163	WP_033503048.1	type IV pilus secretin PilQ family protein	Machinery gene
R3L06_RS11225 (R3L06_11230)	aroK	2336071..2336640 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=894707 R3L06_RS11200 WP_002014066.1 2330855..2331913(+) (pilM) [Acinetobacter baumannii strain SNUBHAB0062]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=894707 R3L06_RS11200 WP_002014066.1 2330855..2331913(+) (pilM) [Acinetobacter baumannii strain SNUBHAB0062]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423