Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | R0Q54_RS10750 | Genome accession | NZ_CP136992 |
| Coordinates | 2007230..2007520 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain J46 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2002230..2012520
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R0Q54_RS10710 (R0Q54_10710) | darA | 2002253..2002582 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| R0Q54_RS10715 (R0Q54_10715) | yaaR | 2002595..2003035 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| R0Q54_RS10720 (R0Q54_10720) | holB | 2003047..2004036 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| R0Q54_RS10725 (R0Q54_10725) | ricT | 2004039..2004866 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| R0Q54_RS10730 (R0Q54_10730) | yabA | 2004881..2005240 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| R0Q54_RS10735 (R0Q54_10735) | trmNF | 2005299..2006042 (+) | 744 | WP_041338388.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| R0Q54_RS10740 (R0Q54_10740) | yazA | 2006029..2006328 (+) | 300 | WP_069837179.1 | GIY-YIG nuclease family protein | - |
| R0Q54_RS10745 (R0Q54_10745) | rsmI | 2006303..2007181 (+) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| R0Q54_RS10750 (R0Q54_10750) | abrB | 2007230..2007520 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| R0Q54_RS10755 (R0Q54_10755) | metG | 2008015..2010009 (+) | 1995 | WP_069963935.1 | methionine--tRNA ligase | - |
| R0Q54_RS10760 (R0Q54_10760) | dayD | 2010089..2010856 (+) | 768 | WP_014478595.1 | TatD family hydrolase | - |
| R0Q54_RS10765 (R0Q54_10765) | yabE | 2011012..2012325 (+) | 1314 | WP_069963936.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=894053 R0Q54_RS10750 WP_003226760.1 2007230..2007520(-) (abrB) [Bacillus subtilis strain J46]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=894053 R0Q54_RS10750 WP_003226760.1 2007230..2007520(-) (abrB) [Bacillus subtilis strain J46]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |