Detailed information    

insolico Bioinformatically predicted

Overview

Name   ciaH   Type   Regulator
Locus tag   RJD36_RS05760 Genome accession   NZ_CP136943
Coordinates   1101052..1102392 (+) Length   446 a.a.
NCBI ID   WP_003064880.1    Uniprot ID   A0AAW6YHF0
Organism   Streptococcus pasteurianus strain WUSP082     
Function   Required for optimal comC expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1096052..1107392
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RJD36_RS05745 (RJD36_05745) phoU 1096776..1097429 (+) 654 WP_003064885.1 phosphate signaling complex protein PhoU -
  RJD36_RS05750 (RJD36_05750) - 1097652..1100195 (+) 2544 WP_003064884.1 M1 family metallopeptidase -
  RJD36_RS05755 (RJD36_05755) ciaR 1100388..1101062 (+) 675 WP_013851854.1 response regulator transcription factor Regulator
  RJD36_RS05760 (RJD36_05760) ciaH 1101052..1102392 (+) 1341 WP_003064880.1 cell wall metabolism sensor histidine kinase WalK Regulator
  RJD36_RS05765 (RJD36_05765) rpsT 1102508..1102759 (-) 252 WP_003064878.1 30S ribosomal protein S20 -
  RJD36_RS05770 (RJD36_05770) coaA 1102834..1103754 (-) 921 WP_003064875.1 type I pantothenate kinase -
  RJD36_RS05775 (RJD36_05775) - 1103870..1104463 (+) 594 WP_003064873.1 class I SAM-dependent methyltransferase -
  RJD36_RS05780 (RJD36_05780) deoC 1104919..1105581 (+) 663 WP_013851852.1 deoxyribose-phosphate aldolase -
  RJD36_RS05785 (RJD36_05785) - 1105776..1106840 (+) 1065 WP_003064867.1 BMP family protein -

Sequence

Protein


Download         Length: 446 a.a.        Molecular weight: 49991.74 Da        Isoelectric Point: 5.2300

>NTDB_id=893550 RJD36_RS05760 WP_003064880.1 1101052..1102392(+) (ciaH) [Streptococcus pasteurianus strain WUSP082]
MLNKLQKKLSSGTFSHFFHFFAVFTGIFVIMTVIILQIMRYGLYSSVDTSLQNAADNADDYVARTMERSDTLQSDDSSTD
AFSGGTGSSGKAKPSTGGVGLSNVSVLLYDEDGKILNALDAFVQFGTLSTTFDEDSVGEIKEQKITTIFGQTEKYHVLAV
KVSSSEYPSIKYATFLVSVRQLDEANERYVTITITVMVIFWIISVVASVYLANWTRKPIMESYEKQKSFVENASHELRTP
LAVLQNRLESLFRRPDATILDNSESIAASLDEVRNMRILTTNLLNLARRDDGLKVELEDIQPATFNEIFENYDMIAEENG
KTFIGHNLAERPIKSDRTLLKQLMTILFDNAIKYTDDDGVIEFTVKTTDKQTILTVADNGPGISDADKVKIFDRFYRVDK
ARTRQKGGFGLGLSLAKQIVDVLKGDIQVKDNQPKGTIFEVRFNRH

Nucleotide


Download         Length: 1341 bp        

>NTDB_id=893550 RJD36_RS05760 WP_003064880.1 1101052..1102392(+) (ciaH) [Streptococcus pasteurianus strain WUSP082]
ATGCTGAATAAATTACAGAAAAAATTATCATCAGGGACATTTTCACATTTCTTTCATTTCTTTGCTGTCTTTACAGGGAT
TTTTGTCATCATGACAGTGATTATTTTGCAGATTATGCGTTATGGACTTTATTCCTCTGTTGATACGAGTTTGCAAAATG
CAGCAGACAATGCTGATGATTATGTCGCGCGAACTATGGAACGTAGTGATACTTTGCAATCGGACGATTCTTCTACGGAC
GCTTTTTCAGGAGGAACAGGTAGTTCTGGGAAAGCGAAACCTAGTACCGGCGGAGTTGGTCTAAGCAACGTTAGCGTTCT
TCTTTATGATGAAGACGGTAAAATTTTAAATGCTTTGGATGCTTTTGTTCAATTTGGAACCTTATCGACAACTTTTGATG
AAGATAGTGTCGGTGAAATCAAAGAACAGAAGATTACGACCATTTTTGGTCAAACCGAGAAATATCATGTGTTGGCTGTA
AAAGTGAGTAGTAGCGAGTATCCTAGTATAAAATACGCTACTTTCCTTGTTAGTGTTCGTCAGTTAGATGAAGCTAACGA
ACGATACGTGACAATTACGATTACTGTTATGGTTATTTTCTGGATTATTTCGGTCGTAGCAAGTGTTTATCTTGCCAATT
GGACAAGAAAACCAATTATGGAAAGCTATGAAAAACAAAAATCCTTTGTCGAAAATGCTAGTCATGAGTTGCGTACACCG
CTTGCTGTTTTGCAGAATCGTTTAGAAAGTCTCTTTAGGCGACCTGATGCTACAATTTTGGACAATAGTGAAAGTATTGC
TGCCAGTCTAGACGAAGTTCGAAATATGAGAATTCTGACCACAAATCTGTTAAATTTAGCACGTCGTGACGATGGTTTGA
AAGTTGAGTTAGAGGATATTCAACCAGCAACTTTCAATGAAATCTTTGAAAATTACGATATGATTGCTGAAGAAAATGGC
AAGACGTTTATCGGACATAATTTGGCAGAGCGACCAATCAAATCAGACCGTACATTGTTAAAACAACTGATGACTATCTT
ATTTGATAATGCCATAAAATACACCGACGATGATGGTGTCATTGAATTTACTGTTAAAACAACAGATAAACAAACAATTC
TGACAGTTGCTGATAACGGCCCAGGGATTAGCGACGCTGATAAAGTTAAGATTTTTGACCGTTTTTATCGTGTGGATAAA
GCACGGACACGTCAAAAAGGCGGTTTTGGTCTAGGATTGTCACTTGCTAAGCAAATTGTTGATGTTTTAAAAGGCGATAT
TCAAGTCAAAGATAACCAACCAAAAGGAACTATTTTTGAAGTTCGTTTTAATCGTCATTAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(227-292)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(336-443)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus mutans UA159

59.142

99.327

0.587
  ciaH Streptococcus pneumoniae Rx1

51.467

99.327

0.511
  ciaH Streptococcus pneumoniae D39

51.467

99.327

0.511
  ciaH Streptococcus pneumoniae R6

51.467

99.327

0.511
  ciaH Streptococcus pneumoniae TIGR4

51.467

99.327

0.511