Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   F6I35_RS10740 Genome accession   NZ_CP136160
Coordinates   2032102..2032869 (+) Length   255 a.a.
NCBI ID   WP_070672281.1    Uniprot ID   -
Organism   Streptococcus anginosus strain UMB8616     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2027102..2037869
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6I35_RS10710 (F6I35_0010705) comE 2027664..2028413 (-) 750 WP_024052478.1 competence system response regulator transcription factor ComE Regulator
  F6I35_RS10715 (F6I35_0010710) comD/comD2 2028413..2029735 (-) 1323 WP_371317911.1 sensor histidine kinase Regulator
  F6I35_RS10720 (F6I35_0010715) - 2029756..2029902 (-) 147 WP_003029519.1 bacteriocin -
  F6I35_RS10730 (F6I35_0010725) rlmH 2030184..2030663 (-) 480 WP_024052476.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  F6I35_RS10735 (F6I35_0010730) htrA 2030857..2032047 (+) 1191 WP_024052475.1 S1C family serine protease Regulator
  F6I35_RS10740 (F6I35_0010735) spo0J 2032102..2032869 (+) 768 WP_070672281.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29588.08 Da        Isoelectric Point: 9.3660

>NTDB_id=888991 F6I35_RS10740 WP_070672281.1 2032102..2032869(+) (spo0J) [Streptococcus anginosus strain UMB8616]
MEKYQYITLNDIQTNPYQPRKEFSEEKIAELASSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLTNIPAIIKE
VTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIALTMGKSRPYITNSVRLLNLPLNIIEAIKEGNISQGHA
RLLINLSEKEQNQWFDKILSQSLSVRQLEKQLHSQQTKTVTKNKHHLFLKEEEKRLKKIFGTEISLQFSKQSQSGKICIH
FSNLEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=888991 F6I35_RS10740 WP_070672281.1 2032102..2032869(+) (spo0J) [Streptococcus anginosus strain UMB8616]
ATGGAAAAATATCAATATATCACACTTAATGACATCCAAACAAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTGCTGAACTTGCTAGTTCTATAAAAGAACATGGGATTATTCAGCCCATCATTGTACGAAAATCTCCGATAATTGGTT
ATGAATTGCTAGCTGGTGAAAGGCGTTTTAGAGCTGCTAAATTAGCAGGCTTAACAAATATACCAGCTATTATAAAAGAA
GTAACAGATGATGAAATGATGAAGCAAGCCATCATTGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTATCAATATTTGATTGACAAAGGGTTGACACATAAAGAAATCGCTCTAACTATGGGAAAATCACGTCCTTATATTA
CAAATTCCGTCCGGTTATTAAATTTACCTCTCAATATTATCGAAGCGATAAAAGAAGGAAATATTTCTCAGGGACACGCT
CGTCTGCTCATTAATCTCTCAGAAAAAGAGCAAAATCAGTGGTTTGATAAAATCTTATCTCAAAGCCTTTCAGTTCGACA
GCTAGAAAAACAATTACATTCCCAACAGACAAAAACTGTAACAAAAAATAAACATCATCTCTTCCTCAAAGAGGAAGAAA
AAAGATTAAAAAAGATATTTGGTACAGAGATTTCTCTTCAATTTTCTAAACAATCTCAATCAGGGAAAATTTGTATTCAT
TTTTCAAACCTAGAAGAATATCAAAGAATTATTGACAGCTTTAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(146-191)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.51

100

0.545