Detailed information NTG0088879

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: OCV29_RS17455
• Genome accession: NZ_AP024861
• Coordinates: 3893785..3894924 (-)
• Length: 379 a.a.
• NCBI ID: WP_073606090.1
• Uniprot ID: A0A1M6EQZ7
• Organism: Vibrio aerogenes strain LMG 19650
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3888785..3899924

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV29_RS17425	hemF	3889389..3890303 (-)	915	WP_073606095.1	oxygen-dependent coproporphyrinogen oxidase	-
OCV29_RS17430	-	3890308..3890865 (-)	558	WP_073606102.1	Sua5/YciO/YrdC/YwlC family protein	-
OCV29_RS17435	purE	3891069..3891554 (+)	486	WP_073606094.1	5-(carboxyamino)imidazole ribonucleotide mutase	-
OCV29_RS17440	-	3891560..3892687 (+)	1128	WP_073606093.1	5-(carboxyamino)imidazole ribonucleotide synthase	-
OCV29_RS17445	-	3892713..3893291 (-)	579	WP_073606092.1	type I DNA topoisomerase	-
OCV29_RS17450	-	3893306..3893782 (-)	477	WP_073606091.1	DUF494 family protein	-
OCV29_RS17455	dprA	3893785..3894924 (-)	1140	WP_073606090.1	DNA-processing protein DprA	Machinery gene
OCV29_RS17460	def	3895144..3895665 (+)	522	WP_073606089.1	peptide deformylase	-
OCV29_RS17465	fmt	3895677..3896624 (+)	948	WP_073606088.1	methionyl-tRNA formyltransferase	-
OCV29_RS17470	rsmB	3896673..3897959 (+)	1287	WP_073606087.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
OCV29_RS17475	trkA	3898002..3899378 (+)	1377	WP_073606086.1	Trk system potassium transporter TrkA	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 41143.14 Da
• Isoelectric Point: 8.4646

>NTDB_id=88879 OCV29_RS17455 WP_073606090.1 3893785..3894924(-) (dprA) [Vibrio aerogenes strain LMG 19650]
MSLHSDSEAENELLFWIKLSTIPRLGIKGLQKILLHDSLSSLSRYTPGEWLHLGLKPEQVQYLTSGANKAAEACLKWRNR
SENRFILPYYAPDYPALLKETVGAPPLLFVLGNTEVLSLPQIAIVGSRAASHPGRQDAWHFANEFVSHGLVVTSGLAIGI
DGHAHDGALKGGGQTVAVLGTGLDHIYPSRHRQLAQRMIESGGALVSEFCPAAPPKPKNFPRRNRIISGMSVGVVVIEAA
EKSGSLITAKYAAEQNRDVFVIPGSIHQAGYRGSNQLIRSGASLVLNPRQVMEEVGTLSSWTIDQKKNQQSELFPPFNVD
KELPFAELLANVGVEATPVDILATRTNIPVHEVMRQLLDLELSGHVVAVAGGYIRKGRG

Nucleotide

• Length: 1140 bp

>NTDB_id=88879 OCV29_RS17455 WP_073606090.1 3893785..3894924(-) (dprA) [Vibrio aerogenes strain LMG 19650]
ATGAGCTTACATTCTGATTCTGAAGCAGAAAATGAACTTTTATTTTGGATAAAGCTATCAACCATACCTCGTTTGGGGAT
CAAGGGGTTACAAAAAATACTGCTTCACGATTCTTTATCTTCTCTGAGTCGTTACACTCCCGGAGAATGGCTGCATCTCG
GACTGAAACCTGAACAGGTCCAATACTTAACTTCCGGAGCAAATAAAGCGGCTGAGGCTTGTCTGAAATGGCGAAATAGA
TCAGAAAATCGTTTTATTCTTCCATATTATGCCCCGGATTATCCCGCCTTATTAAAAGAGACGGTCGGAGCACCACCTTT
ACTCTTTGTGCTGGGAAACACCGAAGTTCTTTCTCTTCCGCAAATCGCGATTGTTGGAAGTCGTGCTGCAAGTCATCCGG
GGCGACAGGATGCCTGGCATTTTGCGAATGAATTTGTCAGTCATGGGTTGGTTGTGACCAGTGGTCTGGCGATTGGTATT
GATGGGCATGCACACGATGGTGCTTTAAAAGGAGGCGGTCAAACTGTCGCAGTGTTGGGAACCGGACTCGATCATATTTA
CCCCTCCCGCCACCGGCAGCTGGCGCAGCGGATGATTGAAAGTGGTGGTGCTTTAGTTTCTGAATTTTGTCCTGCTGCAC
CGCCAAAACCAAAAAACTTTCCCCGCAGAAACAGGATTATTAGTGGAATGTCTGTGGGCGTTGTGGTGATTGAAGCTGCT
GAGAAGAGTGGGTCTCTGATTACAGCAAAATATGCAGCAGAGCAAAACAGAGATGTTTTTGTTATTCCCGGGAGTATTCA
CCAGGCTGGTTACCGGGGAAGTAATCAACTGATACGCAGTGGTGCAAGTTTGGTTCTTAACCCCAGACAAGTGATGGAAG
AAGTGGGAACTCTCTCTTCATGGACGATAGATCAGAAAAAAAATCAACAAAGTGAGCTTTTTCCCCCATTTAATGTAGAC
AAAGAATTGCCATTTGCTGAACTGTTAGCTAACGTAGGAGTAGAAGCTACACCAGTTGATATTCTTGCAACCCGGACCAA
TATACCTGTTCATGAAGTTATGAGACAACTTTTGGATTTAGAACTTTCCGGACATGTTGTTGCTGTTGCTGGTGGTTATA
TTCGTAAGGGGAGGGGCTAG

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (326-372)

• DNA recombination-mediator protein A (DNA_processg_A) (84-286)

3D structure

• AlphaFold DB: A0A1M6EQZ7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio cholerae strain A1552	57.568	97.625	0.562
dprA	Vibrio campbellii strain DS40M4	57.065	97.098	0.554
dprA	Glaesserella parasuis strain SC1401	43.089	97.361	0.42
dprA	Acinetobacter baylyi ADP1	37.931	99.472	0.377
dprA	Legionella pneumophila strain ERS1305867	46.865	79.947	0.375