Detailed information NTG0887623

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RS889_RS02125
• Genome accession: NZ_CP135917
• Coordinates: 428382..429515 (+)
• Length: 377 a.a.
• NCBI ID: WP_315709148.1
• Uniprot ID: -
• Organism: Prodigiosinella aquatilis strain K61
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 423382..434515

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RS889_RS02100	mscL	423493..423903 (-)	411	WP_315709147.1	large-conductance mechanosensitive channel protein MscL	-
RS889_RS02105	trkA	424009..425385 (-)	1377	WP_021013326.1	Trk system potassium transporter TrkA	-
RS889_RS02110	rsmB	425435..426724 (-)	1290	WP_101377472.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
RS889_RS02115	fmt	426787..427728 (-)	942	WP_021013324.1	methionyl-tRNA formyltransferase	-
RS889_RS02120	def	427755..428267 (-)	513	WP_021013323.1	peptide deformylase	-
RS889_RS02125	dprA	428382..429515 (+)	1134	WP_315709148.1	DNA-protecting protein DprA	Machinery gene
RS889_RS02130	-	429487..429960 (+)	474	WP_021013321.1	DUF494 family protein	-
RS889_RS02135	-	429988..430548 (+)	561	WP_021013320.1	type I DNA topoisomerase	-
RS889_RS02140	tsaC	430541..431110 (+)	570	WP_021013319.1	L-threonylcarbamoyladenylate synthase type 1 TsaC	-
RS889_RS02145	aroE	431128..431955 (+)	828	WP_315709149.1	shikimate dehydrogenase	-
RS889_RS02150	-	432009..432131 (+)	123	Protein_418	DUF1488 family protein	-
RS889_RS02155	-	432181..432717 (-)	537	WP_315709150.1	gamma carbonic anhydrase family protein	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 41216.13 Da
• Isoelectric Point: 5.6033

>NTDB_id=887623 RS889_RS02125 WP_315709148.1 428382..429515(+) (dprA) [Prodigiosinella aquatilis strain K61]
MTDTEVWLRLASVRGLGAKQTAKLARQLLDTKDYSPDFMLSFGLNTTQIEQFLTFDRACLENTLCWLDQPGHDLLTYSDT
NYPPLLNNISSPPVLLFVAGDSHLLALPQIAIVGSRDNSAYGEQWGRYFAQELSLNDLIVTSGLAIGIDGIAHRSALEMG
GKTIAVLGSGLKSIYPHRHRPLAERILEQGGALVSEFALTAPPVPANFPRRNRIISGLSLGVLVVEASRRSGSLVTARYA
LEQNREIFALPGPIGNPMMEGTHWLIQQGAYLVTHPKDILEQLNSSLQWFSGLPNESTGETISIRYDELELPFADVLANV
GDEVTPVDVVAERAGQPVPEVVSKLLDLELAGWIAAVPGGYVRLRRAGHVRRTHVLV

Nucleotide

• Length: 1134 bp

>NTDB_id=887623 RS889_RS02125 WP_315709148.1 428382..429515(+) (dprA) [Prodigiosinella aquatilis strain K61]
ATGACTGATACGGAAGTTTGGTTACGTCTGGCATCGGTGCGTGGTTTGGGGGCGAAACAGACGGCAAAGTTGGCCCGGCA
GTTACTGGACACGAAAGATTACTCGCCGGACTTTATGCTCTCCTTTGGATTGAATACGACACAGATCGAACAATTTTTGA
CGTTTGATCGTGCATGTTTGGAAAACACGTTGTGCTGGTTGGATCAACCCGGACACGATCTTCTCACCTATAGCGATACT
AATTATCCCCCTTTGCTGAACAATATCAGCTCTCCGCCTGTACTACTTTTTGTTGCTGGCGATTCCCATTTGCTGGCATT
GCCTCAGATCGCGATCGTGGGTAGTCGTGATAACAGTGCTTATGGTGAACAGTGGGGACGGTACTTTGCTCAGGAACTTA
GCCTGAATGACTTGATTGTTACCAGCGGACTGGCAATAGGAATTGATGGTATTGCACATCGATCAGCGTTGGAGATGGGA
GGGAAAACGATTGCAGTGCTAGGCAGTGGTCTGAAGAGTATTTATCCCCATCGCCATCGGCCTTTGGCAGAACGCATTCT
CGAACAAGGTGGTGCGTTGGTGTCTGAATTTGCATTAACCGCTCCTCCAGTGCCTGCCAATTTTCCACGCCGGAATCGAA
TTATCAGTGGGCTTAGCCTCGGTGTTTTAGTGGTTGAAGCCTCTAGGCGCAGCGGTTCACTAGTAACGGCACGTTATGCG
CTGGAACAAAACAGGGAGATTTTTGCCTTACCGGGCCCGATTGGCAACCCTATGATGGAAGGAACCCATTGGCTGATTCA
GCAAGGTGCGTATTTGGTAACACATCCGAAAGATATTCTGGAACAATTGAACAGTAGTCTACAGTGGTTTTCTGGTCTGC
CCAATGAAAGCACGGGTGAAACTATTTCTATCCGGTATGATGAACTGGAATTGCCATTTGCTGACGTGTTGGCTAACGTA
GGAGATGAGGTTACACCTGTTGACGTTGTCGCTGAACGTGCCGGCCAACCTGTGCCAGAAGTAGTCAGTAAACTATTGGA
TCTGGAGTTAGCAGGATGGATCGCAGCTGTACCCGGCGGCTATGTCCGATTAAGGAGGGCAGGCCATGTTCGACGTACTC
ATGTACTTGTTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (68-274)

• DprA winged helix domain (DprA_WH) (313-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio campbellii strain DS40M4	50.949	97.878	0.499
dprA	Vibrio cholerae strain A1552	46.341	97.878	0.454
dprA	Glaesserella parasuis strain SC1401	44.504	98.939	0.44
dprA	Legionella pneumophila strain ERS1305867	40.909	99.204	0.406
dprA	Haemophilus influenzae Rd KW20	48.951	75.862	0.371