Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   RRU92_RS02115 Genome accession   NZ_CP135436
Coordinates   421745..422503 (+) Length   252 a.a.
NCBI ID   WP_153224631.1    Uniprot ID   A0AA96MQL1
Organism   Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 416745..427503
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RRU92_RS02085 (RRU92_02085) comE 417333..418085 (-) 753 WP_049530388.1 competence system response regulator transcription factor ComE Regulator
  RRU92_RS02090 (RRU92_02090) comD 418082..419401 (-) 1320 WP_315640220.1 competence system sensor histidine kinase ComD Regulator
  RRU92_RS02095 (RRU92_02095) - 419424..419558 (-) 135 WP_315640221.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  RRU92_RS02105 (RRU92_02105) rlmH 419841..420320 (-) 480 WP_153224633.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  RRU92_RS02110 (RRU92_02110) htrA 420504..421688 (+) 1185 WP_315640222.1 S1C family serine protease Regulator
  RRU92_RS02115 (RRU92_02115) spo0J 421745..422503 (+) 759 WP_153224631.1 ParB/RepB/Spo0J family partition protein Regulator
  RRU92_RS02120 (RRU92_02120) dnaA 422725..424080 (+) 1356 WP_153224630.1 chromosomal replication initiator protein DnaA -
  RRU92_RS02125 (RRU92_02125) dnaN 424238..425374 (+) 1137 WP_248035104.1 DNA polymerase III subunit beta -
  RRU92_RS02130 (RRU92_02130) - 425441..425635 (+) 195 WP_000285188.1 DUF951 domain-containing protein -
  RRU92_RS02135 (RRU92_02135) ychF 425721..426836 (+) 1116 WP_045762398.1 redox-regulated ATPase YchF -
  RRU92_RS02140 (RRU92_02140) pth 426909..427478 (+) 570 WP_281335679.1 aminoacyl-tRNA hydrolase -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29127.71 Da        Isoelectric Point: 9.9289

>NTDB_id=886513 RRU92_RS02115 WP_153224631.1 421745..422503(+) (spo0J) [Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006]
MEEFKIVQIKDIQKNPYQPRKEFSEEKIQELAHSIKENGLIQPIIVRKSPVLGYEILAGERRYRASIAAGLSEVPVIVKQ
LSDQDMMLHSIIENLQRENLNPIEEAKAYQSLIDKGFTHTEIAEKMGKSRPYITNLVRLLGLPKHILIEVESGRLSQAHA
RLLIQLSSDKQDKLLNRIQTENLSVRQVEQILQKTKKSSKKEKDHFVKDEEQKLKKILGLDVQIKLQKKDSGKISISFHN
QDEYQQFINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=886513 RRU92_RS02115 WP_153224631.1 421745..422503(+) (spo0J) [Streptococcus sp. DTU_2020_1001019_1_SI_AUS_MUR_006]
ATGGAAGAATTTAAAATTGTTCAAATAAAAGATATTCAAAAAAATCCCTATCAACCTCGGAAGGAATTTTCAGAAGAAAA
AATACAAGAACTGGCCCATTCTATTAAGGAAAACGGCTTGATTCAGCCAATCATCGTTAGAAAATCTCCAGTACTTGGAT
ATGAAATTCTAGCTGGAGAAAGACGGTATCGCGCTTCAATAGCTGCTGGACTTTCAGAAGTTCCAGTCATTGTTAAGCAA
CTTTCTGATCAAGATATGATGCTTCATTCTATCATTGAGAATCTCCAACGAGAAAATTTAAATCCTATCGAGGAAGCTAA
AGCATATCAATCCTTAATTGATAAAGGTTTTACCCACACAGAAATTGCTGAAAAAATGGGAAAATCTCGACCTTATATTA
CAAACCTAGTTCGATTATTAGGACTACCTAAACATATCCTGATAGAGGTTGAAAGTGGTAGACTTTCTCAAGCTCATGCT
AGACTCCTCATTCAATTATCAAGTGATAAACAAGACAAACTCTTGAATCGTATTCAAACTGAAAATCTCTCTGTTCGACA
AGTTGAACAAATACTACAAAAAACGAAGAAGAGCAGCAAAAAAGAAAAAGACCACTTTGTCAAAGACGAAGAGCAAAAAT
TGAAAAAAATACTCGGATTAGATGTTCAGATTAAGCTACAAAAAAAAGATAGTGGTAAAATTTCAATTTCCTTCCATAAC
CAAGATGAATACCAACAATTTATTAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-94)

HTH domain found in ParB protein (HTH_ParB)

(150-193)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

52.964

100

0.532