Detailed information NTG0886149

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RQR14_RS01805
• Genome accession: NZ_CP135196
• Coordinates: 356476..357597 (-)
• Length: 373 a.a.
• NCBI ID: WP_014668489.1
• Uniprot ID: A0A849CTM5
• Organism: Pasteurella multocida strain 80176
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 351476..362597

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RQR14_RS01790	tal	352296..353249 (-)	954	WP_010907246.1	transaldolase	-
RQR14_RS01795	-	353407..353958 (+)	552	WP_014668491.1	DNA-3-methyladenine glycosylase I	-
RQR14_RS01800	lptD	354022..356370 (+)	2349	WP_017861184.1	LPS assembly protein LptD	-
RQR14_RS01805	dprA	356476..357597 (-)	1122	WP_014668489.1	DNA-processing protein DprA	Machinery gene
RQR14_RS01810	-	357750..358343 (-)	594	WP_005718382.1	cytochrome c3 family protein	-
RQR14_RS01815	-	358359..358784 (-)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
RQR14_RS01820	napH	358790..359665 (-)	876	WP_005752145.1	quinol dehydrogenase ferredoxin subunit NapH	-
RQR14_RS01825	napG	359665..360417 (-)	753	WP_005718376.1	ferredoxin-type protein NapG	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41595.75 Da
• Isoelectric Point: 6.2635

>NTDB_id=886149 RQR14_RS01805 WP_014668489.1 356476..357597(-) (dprA) [Pasteurella multocida strain 80176]
MSSYLPLLLRLLQIPRLGSLAIQRLLEHVSPAELMEYDTKAFQQIGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
IHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPFQPPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALPRTENAFSQQVTDTSTINTARITP
EHPELYAKIGYMPVSIDVLAQQVNLPVDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=886149 RQR14_RS01805 WP_014668489.1 356476..357597(-) (dprA) [Pasteurella multocida strain 80176]
ATGTCATCTTATCTGCCTCTTTTATTACGTTTGTTACAAATTCCGCGTTTGGGTTCGCTGGCGATCCAGCGTTTATTGGA
GCACGTCAGTCCAGCGGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATAGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTGGCTACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCACGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCCGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCGGTGGTGGAT
ATCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGAGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAACCTCCTGTGGCAGAAAACTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTGTCTTTGGGGACATTAGTCATTGAAGCTTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATAAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGCCTCGTACGGAGAACGCCTTTTCTCAACAAGTAACAGACACATCAACCATCAATACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCAAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATTTACCTGT
TGATACCTTATTAGTACAGCTTTTAACTTTGGAATTGCAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (319-367)

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

3D structure

• AlphaFold DB: A0A849CTM5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	60.811	99.196	0.603
dprA	Glaesserella parasuis strain SC1401	53.143	93.834	0.499
dprA	Vibrio cholerae strain A1552	45.722	100	0.458
dprA	Vibrio campbellii strain DS40M4	45.405	99.196	0.45
dprA	Legionella pneumophila strain ERS1305867	39.623	99.464	0.394