Detailed information NTG0886103

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RQT66_RS01895
• Genome accession: NZ_CP135192
• Coordinates: 371999..373120 (-)
• Length: 373 a.a.
• NCBI ID: WP_014668489.1
• Uniprot ID: A0A849CTM5
• Organism: Pasteurella multocida strain 190055
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 366999..378120

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RQT66_RS01880	tal	367819..368772 (-)	954	WP_010907246.1	transaldolase	-
RQT66_RS01885	-	368930..369481 (+)	552	WP_014668491.1	DNA-3-methyladenine glycosylase I	-
RQT66_RS01890	lptD	369545..371893 (+)	2349	WP_005757798.1	LPS assembly protein LptD	-
RQT66_RS01895	dprA	371999..373120 (-)	1122	WP_014668489.1	DNA-processing protein DprA	Machinery gene
RQT66_RS01900	-	373273..373866 (-)	594	WP_005718382.1	cytochrome c3 family protein	-
RQT66_RS01905	-	373882..374307 (-)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
RQT66_RS01910	napH	374313..375188 (-)	876	WP_005752145.1	quinol dehydrogenase ferredoxin subunit NapH	-
RQT66_RS01915	napG	375188..375940 (-)	753	WP_005718376.1	ferredoxin-type protein NapG	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41595.75 Da
• Isoelectric Point: 6.2635

>NTDB_id=886103 RQT66_RS01895 WP_014668489.1 371999..373120(-) (dprA) [Pasteurella multocida strain 190055]
MSSYLPLLLRLLQIPRLGSLAIQRLLEHVSPAELMEYDTKAFQQIGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
IHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPFQPPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALPRTENAFSQQVTDTSTINTARITP
EHPELYAKIGYMPVSIDVLAQQVNLPVDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=886103 RQT66_RS01895 WP_014668489.1 371999..373120(-) (dprA) [Pasteurella multocida strain 190055]
ATGTCATCTTATCTGCCTCTTTTATTACGTTTGTTACAAATTCCGCGTTTGGGTTCGCTGGCGATCCAGCGTTTATTGGA
GCACGTCAGTCCAGCGGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATAGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTGGCTACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCACGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCCGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCGGTGGTGGAT
ATCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGAGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAACCTCCTGTGGCAGAAAACTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTGTCTTTGGGGACATTAGTCATTGAAGCTTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATAAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGCCTCGTACGGAGAACGCCTTTTCTCAACAAGTAACAGACACATCAACCATCAATACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCAAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATTTACCTGT
TGATACCTTATTAGTACAGCTTTTAACTTTGGAATTGCAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGCAAAT
AA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (319-367)

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

3D structure

• AlphaFold DB: A0A849CTM5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	60.811	99.196	0.603
dprA	Glaesserella parasuis strain SC1401	53.143	93.834	0.499
dprA	Vibrio cholerae strain A1552	45.722	100	0.458
dprA	Vibrio campbellii strain DS40M4	45.405	99.196	0.45
dprA	Legionella pneumophila strain ERS1305867	39.623	99.464	0.394