Detailed information NTG0885855

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: RQ453_RS02015
• Genome accession: NZ_CP135173
• Coordinates: 430767..431915 (+)
• Length: 382 a.a.
• NCBI ID: WP_003110016.1
• Uniprot ID: A0A0H2ZL88
• Organism: Pseudomonas aeruginosa strain CP-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 425767..436915

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RQ453_RS01990 (RQ453_01990)	-	426918..427214 (-)	297	WP_031628111.1	DUF167 domain-containing protein	-
RQ453_RS01995 (RQ453_01995)	-	427211..427804 (-)	594	WP_003084544.1	YggT family protein	-
RQ453_RS02000 (RQ453_02000)	proC	427815..428636 (-)	822	WP_023092309.1	pyrroline-5-carboxylate reductase	-
RQ453_RS02005 (RQ453_02005)	-	428648..429340 (-)	693	WP_003084549.1	YggS family pyridoxal phosphate-dependent enzyme	-
RQ453_RS02010 (RQ453_02010)	pilT	429555..430589 (+)	1035	WP_003084552.1	type IV pilus twitching motility protein PilT	Machinery gene
RQ453_RS02015 (RQ453_02015)	pilU	430767..431915 (+)	1149	WP_003110016.1	type IV pilus ATPase PilU	Machinery gene
RQ453_RS02020 (RQ453_02020)	czcD	431923..432822 (-)	900	WP_003100957.1	CDF family zinc transporter CzcD	-
RQ453_RS02025 (RQ453_02025)	-	432977..433381 (+)	405	WP_003084560.1	NINE protein	-
RQ453_RS02030 (RQ453_02030)	-	433624..434997 (+)	1374	WP_003084562.1	pyridoxal-phosphate dependent enzyme	-
RQ453_RS02035 (RQ453_02035)	-	434994..436178 (+)	1185	WP_023092310.1	cystathionine gamma-synthase	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 42559.83 Da
• Isoelectric Point: 6.7792

>NTDB_id=885855 RQ453_RS02015 WP_003110016.1 430767..431915(+) (pilU) [Pseudomonas aeruginosa strain CP-1]
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGRVMPVTKTPLSPEQTRETVLGVMNEQQRRDFAENHECNFAISARGIGR
FRVSAFYQRNLVGMVLRRIETNIPTLEELKLPEILKKLALTKRGLVIFVGATGTGKSTSLAAMIGYRNKNSTGHIISIED
PIEYIHQHQGCIVTQREVGLDTDSFEVALKNTLRQAPDVIMIGEVRSRETMDHAVAFAETGHLCLATLHANNANQALERI
IHFFPADRHGQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLLNTPLAADLIRKGEVHELKPLMKRSTEQGMQTFDQA
LYQLYTQGEITYEDALAHADSANDLRLMIKLGSESDADHLSNLTQGLSLEITDDDPAGRRFR

Nucleotide

• Length: 1149 bp

>NTDB_id=885855 RQ453_RS02015 WP_003110016.1 430767..431915(+) (pilU) [Pseudomonas aeruginosa strain CP-1]
ATGGAATTCGAAAAGCTGCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGACCTGTTCATCACCGCCGGCGTACCGCCGTC
GATGAAGGTCAACGGCCGGGTGATGCCGGTGACCAAGACGCCGCTGTCGCCGGAGCAGACCCGCGAGACCGTGCTAGGCG
TGATGAACGAGCAGCAGCGCCGCGATTTCGCCGAGAACCATGAGTGCAACTTCGCCATCAGCGCCCGCGGCATCGGCCGC
TTCCGGGTCAGTGCCTTCTACCAGCGCAACCTGGTGGGCATGGTATTGCGCCGGATCGAGACCAACATCCCGACCCTGGA
AGAGCTGAAGCTCCCGGAAATCCTCAAGAAGCTGGCGCTGACCAAGCGCGGCCTGGTGATCTTCGTCGGCGCCACCGGCA
CCGGCAAGTCCACCTCGCTGGCGGCGATGATCGGCTACCGCAACAAGAACTCCACCGGGCACATCATCTCCATCGAGGAC
CCGATCGAGTACATCCACCAGCACCAGGGCTGCATCGTCACCCAGCGCGAGGTGGGGCTGGACACCGACTCCTTCGAGGT
GGCGCTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATCATGATCGGCGAGGTGCGCTCGCGGGAGACCATGGACCATG
CCGTGGCCTTCGCCGAGACCGGCCACCTGTGCCTGGCGACCCTGCACGCGAACAACGCCAACCAGGCGCTGGAGCGGATC
ATCCACTTCTTCCCGGCCGACCGTCATGGCCAGGTGTGGATGGACCTGTCGCTGAACCTCAAGGCCATCGTCGCCCAGCA
ACTGGTGCCGACCCCCGACGGCAAGGGGCGGCGGGCGGTGATCGAGGTGCTGCTGAACACCCCGCTGGCCGCCGACCTGA
TCCGCAAGGGCGAGGTGCACGAGCTGAAGCCGCTGATGAAGCGCTCCACCGAGCAGGGCATGCAGACCTTCGACCAGGCG
CTGTACCAGCTCTACACCCAGGGCGAGATCACCTACGAGGACGCCCTGGCCCACGCCGACTCGGCCAACGACCTGCGCCT
GATGATCAAGCTCGGTTCGGAAAGCGACGCCGACCACCTGTCGAACCTGACCCAGGGCCTGAGCCTGGAAATCACCGACG
ACGACCCTGCCGGCCGGCGCTTCCGCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (111-270)

3D structure

• AlphaFold DB: A0A0H2ZL88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	88.22	100	0.882
pilU	Acinetobacter baylyi ADP1	65.266	93.455	0.61
pilU	Vibrio cholerae strain A1552	60.286	91.623	0.552
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	43.068	88.743	0.382