Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   RQL82_RS17150 Genome accession   NZ_CP135159
Coordinates   3621018..3622151 (+) Length   377 a.a.
NCBI ID   WP_284091620.1    Uniprot ID   -
Organism   Acinetobacter pittii strain AR3651     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3616018..3627151
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RQL82_RS17125 (RQL82_17195) - 3616277..3616483 (-) 207 WP_000182542.1 hypothetical protein -
  RQL82_RS17130 (RQL82_17200) oprC 3616533..3618647 (-) 2115 WP_284091623.1 TonB-dependent copper receptor -
  RQL82_RS17135 (RQL82_17205) - 3618720..3619145 (-) 426 WP_002114087.1 DUF2946 family protein -
  RQL82_RS17140 (RQL82_17210) def 3619189..3619719 (-) 531 WP_032055797.1 peptide deformylase -
  RQL82_RS17145 (RQL82_17215) tsaP 3619843..3620997 (+) 1155 WP_329759966.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  RQL82_RS17150 (RQL82_17220) dprA 3621018..3622151 (+) 1134 WP_284091620.1 DNA-processing protein DprA Machinery gene
  RQL82_RS17155 (RQL82_17225) yrdC 3622203..3622772 (+) 570 WP_005072030.1 L-threonylcarbamoyladenylate synthase -
  RQL82_RS17160 (RQL82_17230) - 3623165..3624085 (-) 921 WP_284091619.1 DMT family transporter -
  RQL82_RS17165 (RQL82_17235) - 3624190..3624843 (-) 654 WP_079380979.1 TetR/AcrR family transcriptional regulator -
  RQL82_RS17170 (RQL82_17240) nepI 3624979..3626193 (+) 1215 WP_046813020.1 MFS transporter -
  RQL82_RS17175 (RQL82_17245) - 3626215..3626979 (+) 765 WP_208753430.1 helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 41734.33 Da        Isoelectric Point: 6.5804

>NTDB_id=885762 RQL82_RS17150 WP_284091620.1 3621018..3622151(+) (dprA) [Acinetobacter pittii strain AR3651]
MLTQLSSHHCHTLKVWYLVQHSLVSFKKIVDYFGNCEKAVQPAGLSQWHNLGLHANHLKRVAEFQTAQGQAQFEKLIEQI
QQYTDFILTADDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDSTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQNSTEEAIVSSAPEI
PEHLINLYQSLDWVGQNIDQLVLHHSQPVAELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=885762 RQL82_RS17150 WP_284091620.1 3621018..3622151(+) (dprA) [Acinetobacter pittii strain AR3651]
ATGCTTACTCAACTTTCTTCACACCATTGCCACACGCTTAAAGTGTGGTATTTGGTGCAACACTCTTTAGTCAGCTTTAA
AAAAATTGTCGATTATTTTGGTAACTGTGAAAAGGCAGTCCAACCTGCTGGATTATCTCAATGGCACAATCTCGGGTTAC
ATGCTAATCATTTAAAACGTGTAGCTGAATTTCAAACTGCTCAGGGCCAAGCTCAGTTTGAAAAACTAATTGAGCAGATC
CAGCAATATACCGACTTTATTTTAACGGCAGATGACTCAGGCTATCCCACTCAGTTATTACCTTATACAGATCACCCACC
TATCATTTTTGGAAAAGGCCAAGCTCAAGCTTTGTTGCAACCACAAATTGCGATTGTAGGTAGCCGAAAACCAAGCCCAC
ATGGTCGTCAGGTTGCTTATGATTTTGCCTATTACTTAAGTGAAAAAGGTTTTTATGTGAGTAGTGGATTGGCATATGGT
ATTGATGAAGCTGCTCACCAAGGAGCATCAGCACATCAACGTACAATTGCAGTAACAGGAACTGGTTTAGACAGTACCTA
CCCTGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAATGGCGCGATTATTACTGAATTTTTGCCTGGAACAC
CCCCATTACAACAGCATTTCCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTGTTAGTGGTAGAAGCTACA
TTAAAAAGTGGTTCTCTCATCACTGCGAACAAAGCTGCTGAACAAGGTAAGACTGTATTTGCCATTCCTGGTCATATTTA
CAGTGAGTTTCATCAAGGTTGCCATCAACTTATTCGTGAGGGAGCAATTTTAGTCGATCATCCTGAACAAATTATTGAAG
ACCTTGCTTTACCTACTCAATGGCAAAGTCAGCAACAAAACTCCACCGAGGAGGCTATAGTTTCTAGTGCCCCAGAAATT
CCTGAGCATTTAATTAACCTTTATCAATCTTTAGACTGGGTCGGACAAAATATTGATCAGCTTGTCTTACATCACTCTCA
GCCTGTTGCAGAACTCACCTCTTCACTGATGGAACTAGAACTACTTGGTTTATGTATGCAACAATCAGGATTGTATTTAC
GTTGTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

90.981

100

0.91

  dprA Acinetobacter baumannii strain A118

90.451

100

0.905

  dprA Acinetobacter baylyi ADP1

71.129

100

0.719

  dprA Vibrio cholerae strain A1552

43.544

88.329

0.385