Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   RNZ43_RS07675 Genome accession   NZ_CP135143
Coordinates   1438011..1438607 (+) Length   198 a.a.
NCBI ID   WP_070081746.1    Uniprot ID   -
Organism   Bacillus velezensis strain L33a     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1433011..1443607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RNZ43_RS07645 - 1433225..1433680 (+) 456 WP_172614650.1 flavodoxin -
  RNZ43_RS07650 dapD 1433762..1434472 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  RNZ43_RS07655 - 1434543..1435667 (+) 1125 WP_014304923.1 N-acetyldiaminopimelate deacetylase -
  RNZ43_RS07660 - 1435728..1435973 (+) 246 WP_003154596.1 YkuS family protein -
  RNZ43_RS07665 - 1436007..1436813 (-) 807 WP_003154595.1 mechanosensitive ion channel family protein -
  RNZ43_RS07670 - 1437101..1437559 (+) 459 WP_146283574.1 redoxin domain-containing protein -
  RNZ43_RS07675 rok 1438011..1438607 (+) 597 WP_070081746.1 transcriptional regulator Rok Regulator
  RNZ43_RS07680 - 1438628..1439620 (-) 993 WP_069473386.1 sporulation protein -
  RNZ43_RS07685 - 1439766..1440368 (+) 603 WP_077722144.1 molybdenum cofactor guanylyltransferase -
  RNZ43_RS07690 - 1440420..1441439 (+) 1020 WP_003154586.1 molybdopterin-synthase adenylyltransferase MoeB -
  RNZ43_RS07695 glp 1441457..1442749 (+) 1293 WP_416406291.1 gephyrin-like molybdotransferase Glp -
  RNZ43_RS07700 mobB 1442710..1443231 (+) 522 WP_041482361.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22583.61 Da        Isoelectric Point: 9.6909

>NTDB_id=885583 RNZ43_RS07675 WP_070081746.1 1438011..1438607(+) (rok) [Bacillus velezensis strain L33a]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKNDSLPVLAELAAQEMRSYQKPQ
TQPQSSQQQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=885583 RNZ43_RS07675 WP_070081746.1 1438011..1438607(+) (rok) [Bacillus velezensis strain L33a]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTGAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACGGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAATGACTCCCTCCCGGTACTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCAGCAGATGCAGTCTATTACGTCTCTTCCCGCAGGCATTCCAGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCGAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACATTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

87.629

97.98

0.859