Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RNZ41_RS09515 Genome accession   NZ_CP135138
Coordinates   2132611..2132997 (-) Length   128 a.a.
NCBI ID   WP_050324978.1    Uniprot ID   A0A9X1UQ18
Organism   Moraxella sp. DOX410     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2127611..2137997
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RNZ41_RS09495 (RNZ41_09495) - 2129548..2129802 (-) 255 WP_083106461.1 CheR family methyltransferase -
  RNZ41_RS09500 (RNZ41_09500) - 2130006..2131040 (-) 1035 Protein_1852 methyl-accepting chemotaxis protein -
  RNZ41_RS09505 (RNZ41_09505) - 2131460..2131996 (-) 537 WP_065254123.1 chemotaxis protein CheW -
  RNZ41_RS09510 (RNZ41_09510) - 2132002..2132364 (-) 363 WP_050324979.1 PleD family two-component system response regulator -
  RNZ41_RS09515 (RNZ41_09515) pilG 2132611..2132997 (-) 387 WP_050324978.1 twitching motility response regulator PilG Regulator
  RNZ41_RS09520 (RNZ41_09520) - 2133486..2134736 (+) 1251 WP_314027171.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14121.17 Da        Isoelectric Point: 4.6115

>NTDB_id=885549 RNZ41_RS09515 WP_050324978.1 2132611..2132997(-) (pilG) [Moraxella sp. DOX410]
MDANFEGLKVMIIDDSKTIRRTAETLLAKAGCEVTTAVDGFDALAKIADTNPDLIFVDIMMPRLDGYQTCSLIKNNADFA
ATPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKEELFDTIERHRPAS

Nucleotide


Download         Length: 387 bp        

>NTDB_id=885549 RNZ41_RS09515 WP_050324978.1 2132611..2132997(-) (pilG) [Moraxella sp. DOX410]
ATGGATGCAAATTTTGAAGGCCTAAAAGTCATGATTATTGACGATTCAAAAACCATTCGTCGTACCGCAGAGACGTTACT
TGCCAAAGCAGGCTGTGAGGTGACTACTGCCGTTGATGGCTTTGATGCGTTGGCAAAAATTGCGGATACCAACCCAGATT
TGATTTTTGTCGATATCATGATGCCACGCCTCGACGGTTATCAGACTTGTTCACTAATCAAAAACAACGCAGATTTTGCT
GCCACGCCCGTGATTATGCTGTCATCAAAAGATGGCTTGTTTGATAAAGCGCGCGGTCGTATCGTCGGCTCAGATGAGTA
CTTGACCAAACCATTTAGTAAAGAAGAGCTATTTGATACCATTGAACGTCATCGTCCTGCGTCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.387

96.875

0.711
  vicR Streptococcus mutans UA159

43.966

90.625

0.398
  chiS Vibrio cholerae strain A1552

37.6

97.656

0.367
  pilH Synechocystis sp. PCC 6803

41.228

89.063

0.367