Detailed information NTG0884882

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: RMP67_RS07940
• Genome accession: NZ_CP135087
• Coordinates: 1612323..1613264 (-)
• Length: 313 a.a.
• NCBI ID: WP_313919384.1
• Uniprot ID: -
• Organism: Streptococcus suis strain ID26102
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1607323..1618264

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RMP67_RS07915 (RMP67_07915)	prsA	1607428..1608429 (-)	1002	WP_014735705.1	peptidylprolyl isomerase PrsA	-
RMP67_RS07920 (RMP67_07920)	-	1608490..1609209 (-)	720	WP_050571607.1	O-methyltransferase	-
RMP67_RS07925 (RMP67_07925)	-	1609284..1609832 (-)	549	WP_313919378.1	DUF6630 family protein	-
RMP67_RS07930 (RMP67_07930)	-	1609848..1610288 (-)	441	WP_313919380.1	hypothetical protein	-
RMP67_RS07935 (RMP67_07935)	pepF	1610290..1612092 (-)	1803	WP_313919381.1	oligoendopeptidase F	Regulator
RMP67_RS07940 (RMP67_07940)	coiA	1612323..1613264 (-)	942	WP_313919384.1	competence protein CoiA family protein	Machinery gene
RMP67_RS07945 (RMP67_07945)	metG	1613325..1615328 (-)	2004	WP_313919386.1	methionine--tRNA ligase	-
RMP67_RS07950 (RMP67_07950)	-	1615537..1616286 (-)	750	WP_313919388.1	hypothetical protein	-
RMP67_RS07955 (RMP67_07955)	-	1616368..1616979 (-)	612	WP_313919390.1	DUF3885 domain-containing protein	-
RMP67_RS07960 (RMP67_07960)	-	1617102..1617977 (+)	876	WP_313919392.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 313 a.a.
• Molecular weight: 36206.80 Da
• Isoelectric Point: 7.6424

>NTDB_id=884882 RMP67_RS07940 WP_313919384.1 1612323..1613264(-) (coiA) [Streptococcus suis strain ID26102]
MLVALDEDGQVFNVLENPAPQGCYSCPGCGGLVRYKSGKVLRSHFAHVTLRDCHYFSENESAQHLSLKSCLYSWLINAEQ
VELEKCLPSIGQVADLFVNNSLALEVQCSSLPISRLQVRTQAYHEAGLQVLWLLGKGLWIKERLSKLHKQFLSFSMNMGF
HLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLEILRLPFAKQALSHLTCPLDRDLPRYIAQQLYYKSPNWL
ALQAESYSRGENLLTKTAEEWYPHIRLPRSAIGFAQIQKDLTLVYQDFDQYYGNIEDKQKQVLYPPIIYRKPM

Nucleotide

• Length: 942 bp

>NTDB_id=884882 RMP67_RS07940 WP_313919384.1 1612323..1613264(-) (coiA) [Streptococcus suis strain ID26102]
ATGTTAGTTGCACTTGATGAAGATGGACAAGTTTTTAATGTCTTGGAAAATCCTGCGCCGCAAGGTTGCTATTCTTGTCC
AGGTTGTGGAGGACTGGTTCGATACAAATCCGGAAAAGTTCTGCGTTCGCACTTTGCCCATGTCACCCTGCGGGACTGCC
ACTATTTTTCCGAGAATGAGTCGGCCCAGCACCTGTCACTTAAGTCTTGTCTGTACAGTTGGTTAATCAATGCCGAACAA
GTTGAACTTGAAAAATGCCTGCCTAGTATAGGGCAGGTCGCTGATTTATTTGTCAATAATAGTCTAGCTTTGGAAGTCCA
GTGTTCCAGTCTACCCATTTCTCGTTTGCAGGTGAGGACGCAAGCCTATCATGAAGCTGGTCTTCAGGTTCTCTGGCTGT
TGGGAAAAGGCCTATGGATAAAAGAAAGATTAAGTAAATTACACAAGCAATTTCTCTCTTTTAGTATGAACATGGGTTTT
CACCTCTGGGAATTGGATGACGAGAAAAAAGAATTGCGTCTTCGTTACCTTATTCACGAAGACTTACGAGGTAAGGTCCA
CTGTCTGACAAAGGTTTTTCCATTTGGCGAGGGAAATTTATTGGAAATCTTGCGTCTGCCTTTTGCCAAGCAAGCTTTAT
CGCATCTTACTTGCCCGTTAGATAGGGATTTGCCTCGCTACATTGCTCAACAGCTTTATTACAAATCCCCCAATTGGTTA
GCCCTGCAGGCAGAGTCTTATAGCCGAGGGGAGAATTTGCTGACAAAGACGGCAGAAGAATGGTACCCACATATCCGTCT
ACCCCGCTCTGCCATTGGCTTTGCCCAAATACAAAAAGATTTAACCTTAGTTTATCAGGATTTTGACCAGTATTACGGCA
ATATTGAAGACAAGCAGAAACAGGTTCTATATCCACCTATAATTTATAGAAAACCAATGTAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (24-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	53.205	99.681	0.53
coiA	Streptococcus pneumoniae TIGR4	51.282	99.681	0.511
coiA	Streptococcus pneumoniae Rx1	51.282	99.681	0.511
coiA	Streptococcus pneumoniae D39	51.282	99.681	0.511
coiA	Streptococcus pneumoniae R6	51.282	99.681	0.511
coiA	Lactococcus lactis subsp. cremoris KW2	41.562	100	0.425