Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | RMQ63_RS06435 | Genome accession | NZ_CP135063 |
| Coordinates | 1314747..1315700 (+) | Length | 317 a.a. |
| NCBI ID | WP_024414316.1 | Uniprot ID | A0A4T2H6N2 |
| Organism | Streptococcus suis strain ID32563 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1309747..1320700
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RMQ63_RS06395 (RMQ63_06395) | - | 1310014..1310964 (-) | 951 | WP_074391326.1 | S66 peptidase family protein | - |
| RMQ63_RS06400 (RMQ63_06400) | comYA | 1311050..1312000 (+) | 951 | WP_074391327.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RMQ63_RS06405 (RMQ63_06405) | comYB | 1311912..1312949 (+) | 1038 | WP_269472402.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RMQ63_RS06410 (RMQ63_06410) | comYC | 1312951..1313232 (+) | 282 | WP_074391328.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RMQ63_RS06415 (RMQ63_06415) | comGD | 1313213..1313620 (+) | 408 | WP_074391329.1 | competence type IV pilus minor pilin ComGD | - |
| RMQ63_RS06420 (RMQ63_06420) | comYE | 1313592..1313885 (+) | 294 | WP_024401507.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| RMQ63_RS06425 (RMQ63_06425) | comGF/cglF | 1313872..1314306 (+) | 435 | WP_044762030.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RMQ63_RS06430 (RMQ63_06430) | comGG | 1314284..1314697 (+) | 414 | WP_074391330.1 | competence type IV pilus minor pilin ComGG | - |
| RMQ63_RS06435 (RMQ63_06435) | comYH | 1314747..1315700 (+) | 954 | WP_024414316.1 | class I SAM-dependent methyltransferase | Machinery gene |
| RMQ63_RS06440 (RMQ63_06440) | - | 1315750..1316937 (+) | 1188 | WP_044680792.1 | acetate kinase | - |
| RMQ63_RS06445 (RMQ63_06445) | - | 1317254..1317805 (+) | 552 | WP_044680793.1 | folate family ECF transporter S component | - |
| RMQ63_RS06450 (RMQ63_06450) | - | 1317861..1319117 (+) | 1257 | WP_074391333.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| RMQ63_RS06455 (RMQ63_06455) | pepA | 1319162..1320223 (-) | 1062 | WP_024399998.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35601.70 Da Isoelectric Point: 4.4571
>NTDB_id=884690 RMQ63_RS06435 WP_024414316.1 1314747..1315700(+) (comYH) [Streptococcus suis strain ID32563]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVAGQHETDLVVNNNKTLKQLDLTKEEWRRAFQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVSTSKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARPLAPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVAGQHETDLVVNNNKTLKQLDLTKEEWRRAFQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVSTSKVTVLEIGSGTGNLAQTILNASQKELDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARPLAPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=884690 RMQ63_RS06435 WP_024414316.1 1314747..1315700(+) (comYH) [Streptococcus suis strain ID32563]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGCACCAA
TATCTACGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGGTCAGCATGAGACAGATCTTGTTGTCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTTCCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTGGACCAACTAGTATC
TACTTCCAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTAGATTACTTGGGGATTGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTGATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCCAGCCGTTATCAGGTTGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAGTCCCTCAAATATCTGGAAAAGGATGGATTCGCTATTCTCTTGGCTCCAAATGATTTGTTGACTAGTCCGCAA
AGCGATTTACTGAAAGGCTGGTTACAGGAGCAAGCCAATATCGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGACCGTTGGCGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGCACCAA
TATCTACGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTGGTCAGCATGAGACAGATCTTGTTGTCAATAATAACA
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTTCCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTATAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTGGACCAACTAGTATC
TACTTCCAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTCAACGCCAGCCAGAAAG
AATTAGATTACTTGGGGATTGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTGATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCCAGCCGTTATCAGGTTGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAGTCCCTCAAATATCTGGAAAAGGATGGATTCGCTATTCTCTTGGCTCCAAATGATTTGTTGACTAGTCCGCAA
AGCGATTTACTGAAAGGCTGGTTACAGGAGCAAGCCAATATCGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGACCGTTGGCGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
61.076 |
99.685 |
0.609 |
| comYH | Streptococcus mutans UA159 |
60.759 |
99.685 |
0.606 |