Detailed information NTG0882236

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: RKS75_RS17225
• Genome accession: NZ_CP134599
• Coordinates: 3548897..3549955 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain XH1015
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3543897..3554955

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RKS75_RS17200 (RKS75_17205)	aroK	3544167..3544736 (-)	570	WP_000643712.1	shikimate kinase AroK	-
RKS75_RS17205 (RKS75_17210)	pilQ	3544748..3546913 (-)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
RKS75_RS17210 (RKS75_17215)	pilP	3546981..3547508 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
RKS75_RS17215 (RKS75_17220)	pilO	3547519..3548259 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
RKS75_RS17220 (RKS75_17225)	pilN	3548256..3548897 (-)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
RKS75_RS17225 (RKS75_17230)	pilM	3548897..3549955 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
RKS75_RS17230 (RKS75_17235)	ponA	3550118..3552673 (+)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
RKS75_RS17235 (RKS75_17240)	-	3552691..3553515 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
RKS75_RS17240 (RKS75_17245)	-	3553518..3553850 (-)	333	WP_000169594.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=882236 RKS75_RS17225 WP_002014066.1 3548897..3549955(-) (pilM) [Acinetobacter baumannii strain XH1015]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=882236 RKS75_RS17225 WP_002014066.1 3548897..3549955(-) (pilM) [Acinetobacter baumannii strain XH1015]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423