Detailed information NTG0881543

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: RKQ62_RS01490
• Genome accession: NZ_CP134566
• Coordinates: 311606..312664 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain XH1038
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 306606..317664

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RKQ62_RS01475 (RKQ62_01480)	-	307712..308044 (+)	333	WP_000169602.1	hypothetical protein	-
RKQ62_RS01480 (RKQ62_01485)	-	308047..308871 (+)	825	WP_005122435.1	putative RNA methyltransferase	-
RKQ62_RS01485 (RKQ62_01490)	ponA	308890..311445 (-)	2556	WP_005137336.1	penicillin-binding protein PBP1a	-
RKQ62_RS01490 (RKQ62_01495)	pilM	311606..312664 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
RKQ62_RS01495 (RKQ62_01500)	-	312664..313304 (+)	641	Protein_285	PilN domain-containing protein	-
RKQ62_RS01500 (RKQ62_01505)	pilO	313301..314041 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
RKQ62_RS01505 (RKQ62_01510)	pilP	314052..314579 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
RKQ62_RS01510 (RKQ62_01515)	pilQ	314642..316807 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
RKQ62_RS01515 (RKQ62_01520)	aroK	316819..317388 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=881543 RKQ62_RS01490 WP_002014066.1 311606..312664(+) (pilM) [Acinetobacter baumannii strain XH1038]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=881543 RKQ62_RS01490 WP_002014066.1 311606..312664(+) (pilM) [Acinetobacter baumannii strain XH1038]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACCCGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACAACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTACGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGCTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423